Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0597 ATGGCTTTCTGGGACGGAGCTCCATGTCTGGAAGAAGGTTCAATGGGTTTGCCCTTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCTTTCATTAGAAAAAGAATGGATAGGTATGGACCTATATTCAGAACAAGTTTGGTGGGAAGACCGCTGATTGTCTCAACAGACCCCGACTTGAATTACTTTATCTTTCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCTGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCATTGCACGGCTTCATGTATAAATATCTAAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAGACAATGGTCATCTCATGACTCAGTTGAATTGAAGGATAAGACTGCAAGTATGATTTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCAGAGAATTTGAGAGAGAACTTTGTTGCATTCATACAAGGCTTGATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTATAACAAATGCTTACAGGGTAGGAAAAGAGCAATGAGGATGCTGAAGAACATGTTACAAGAAAGGCGGACAAATCCAAGGAAACAACAAATTGATTTTTTCGATTTTGTTCTTGAAGAGCTGGAGAAAGATGGAACTCTTCTTACTGAGGAAATTGCTTTGGACCTTATGTTTGTACTACTTTTTGCAAGCTTTGAAACTACTTCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGGCTGAACATGAGGGAATATTGAAGAGAAGGGAAAATCCAGATTCTGGGCTTACATGGGGGGAATACAAATCCATGACATTCACATTTCAGTTTATAAATGAAACTGTTAGACTGGCAAATATAGTTCCAGGCATCTTTCGAAAGGCACTAAAAGACATCCAGTTTAAGGGATATACTATCCCATCTGGTTGGGCTGTTATGGTCTGCCCTCCAGCCGTGCACTTAAATCCAGAAAAATATGTCGACCCCCTTGCTTTTAACCCGTGGCGGTGGGAGAAATCTGAACTGAATGGAGCCTCTAAACATTTCATGGCTTTTGGTGGTGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTGCAAATGGCTGTTTTTCTCCATTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAAGGGGGCAACATCGTTCGAACTCCCGGTTTACAGTTTCCCAATGGCTTTCACGTTCAGATAATGGAGAAATAA 1350 41.26 MAFWDGAPCLEEGSMGLPLLGETLQFFAPNTSSDIPPFIRKRMDRYGPIFRTSLVGRPLIVSTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLRKMIPEVEAVATRRLRQWSSHDSVELKDKTASMIFDLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYNKCLQGRKRAMRMLKNMLQERRTNPRKQQIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKRRENPDSGLTWGEYKSMTFTFQFINETVRLANIVPGIFRKALKDIQFKGYTIPSGWAVMVCPPAVHLNPEKYVDPLAFNPWRWEKSELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPNGFHVQIMEK 449
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 5467411 5471505 - CrPI670011_10g005970.1 Cre10g0597 509899
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0597 449 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 PRINTS P450 superfamily signature 390 399 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 PRINTS P450 superfamily signature 259 276 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 CDD CYP90-like 42 446 - -
Cre10g0597 449 PRINTS E-class P450 group IV signature 37 60 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 PRINTS E-class P450 group IV signature 383 399 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 PRINTS E-class P450 group IV signature 360 378 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 PRINTS E-class P450 group IV signature 311 327 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 PRINTS E-class P450 group IV signature 399 417 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 PRINTS E-class P450 group IV signature 344 358 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 Pfam Cytochrome P450 16 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 Gene3D Cytochrome P450 7 448 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 SUPERFAMILY Cytochrome P450 13 445 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0597 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 392 401 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre10g0597 449 PANTHER CYTOCHROME P450 26 11 420 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cre10g0597 449 FunFam Cytochrome P450 family protein 7 448 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g0929 Cre-Chr6:2701168 Cre10g0597 Cre-Chr10:5467411 3.20E-118 dispersed
Cre10g0597 Cre-Chr10:5467411 Cre11g0978 Cre-Chr11:7060392 3.10E-75 dispersed
Cre10g0597 Cre-Chr10:5467411 Cre09g0053 Cre-Chr9:821641 6.90E-67 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0597 - - - 0.0