Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0602 ATGGGTTCTTGTCATTCGTCTCCTAAAGGGCCGCAGAGCAGAGGCGGCGTTTATTCTGCCGCCGCAGCGCCAGCTGAGGCTCCGACGGCTTCTACAACAGAGTCATTTTCTTCTTCTTCTTCATTTTTGTACTCGACGACCAGTAAGCGGCGTTGGTGGAATAAGAATTCGACTAAAACTTTTGGGGTTGGGGTTTGTTCAGAGAAGGTTCATGAATTTGAGGTTCCGGGGAGGAGTTGTTCAAATGGGTCATCGAGAATTGCTTGTTTGTATACGCAGCAGGGGAAGAAAGGGGTTAATCAAGACGCCATGATTGTGCAGGAGAATTTCAGTTCAAGAAGAGATACAGTATTTTGTGGGGTATTTGATGGACATGGTCCTTTTGGACATATGGTTGCAAAAAAAGTTCGTGATACTCTCCCTCTAATCCTGTGTACACAATGGACATCTAAATCAAATGAAGATCAAAGCAACCTCTTTAAGACAAGACATTCCCGAAGTTCAAATTCTGAAGCTTCTGTTGCCCTAGGTGGAGATGAAGATTCTTACAAGTCATTGGAGGCCGAAGAAAATGAAAAATTCCCCAAAATGTTTCTACCACTCAAAGTATCTTTACTGAAGTCCTTCAAATTAATGGATAAAGAGTTGAAACTGCATCCCAAAATTGATTGTTTTTGCAGTGGATCGACGGCCGTGACTCTAATAAAGCAGGGTCAGAACCTTGTACTTGGAAATGTTGGTGACTCGAGAGCGGTGCTGGCTACGATAGACGAAGATAACTCTTTGATTCCAGTTCAATTAACGGTGGACTTGAAACCTGACCTTCCTGGTGAAGCTGCTAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCCGAAGTTGCACGAGTATGGTTGCCAAATAACGATTCACCTGGTTTGGCGATGGCGAGAGCTTTTGGAGACTTTTGTCTGAAGGATTTCGGTCTTATTTCTGTTCCCGATGTTTATTATCGTCGCCTTACTGCGAGAGATCAGTTTGTAATTCTTGCCACTGATGGGGTTTGGGACGTTCTTTCGAATAAAGAAGCAATCGAAATTGTAGCATCAGCCCCTTCTCGCGAAACAGCCGCCAGAGCTCTTGTCGACTGTGCCGTTCGTGCATGGAGGCTGAAATATCCTACATCCAAGAATGACGATTGTGCTGTTGTATGTCTCTTTCTTGAGTATGAGCCTGAAGTAGAAGAAAACACGGAAACTTGTGCAAAACCAGTGGAAGAAGTTCTGGCCACGCCAAGCGAGGATGAAAAGGACATTGAAGTTGATTCTGATGATCGTAGAACGACTGTTGTCGAGCAGTCAGGCACTCTACAAAACTCTAATGAGATTGTACCTGTCTCCGACTCAACGGATGAGAAGGTGGCAGCTGGAGGCCGAAACCCATCGAAGAGAAGCTTAGCTGAGTGCATTTCAAGTGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTTTGCTAAGCCTTCCAAGGTTCCTCTCTGGTGACAAAAGATCAGGCAGTTGGAGGAAGTGGCTATGA 1581 45.22 MGSCHSSPKGPQSRGGVYSAAAAPAEAPTASTTESFSSSSSFLYSTTSKRRWWNKNSTKTFGVGVCSEKVHEFEVPGRSCSNGSSRIACLYTQQGKKGVNQDAMIVQENFSSRRDTVFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSNEDQSNLFKTRHSRSSNSEASVALGGDEDSYKSLEAEENEKFPKMFLPLKVSLLKSFKLMDKELKLHPKIDCFCSGSTAVTLIKQGQNLVLGNVGDSRAVLATIDEDNSLIPVQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRRLTARDQFVILATDGVWDVLSNKEAIEIVASAPSRETAARALVDCAVRAWRLKYPTSKNDDCAVVCLFLEYEPEVEENTETCAKPVEEVLATPSEDEKDIEVDSDDRRTTVVEQSGTLQNSNEIVPVSDSTDEKVAAGGRNPSKRSLAECISSEEEEWSALEGITRVNSLLSLPRFLSGDKRSGSWRKWL 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5556265 5565115 - CrPI670011_10g006020.1 Cre10g0602 509904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0602 526 MobiDBLite consensus disorder prediction 1 37 - -
Cre10g0602 526 FunFam probable protein phosphatase 2C 33 82 408 - -
Cre10g0602 526 PANTHER PROTEIN PHOSPHATASE 80 404 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cre10g0602 526 SMART PP2C_4 76 403 IPR001932 -
Cre10g0602 526 Gene3D - 77 407 IPR036457 -
Cre10g0602 526 ProSiteProfiles PPM-type phosphatase domain profile. 87 405 IPR001932 -
Cre10g0602 526 Pfam Protein phosphatase 2C 192 383 IPR001932 -
Cre10g0602 526 CDD PP2Cc 86 405 IPR001932 -
Cre10g0602 526 MobiDBLite consensus disorder prediction 429 446 - -
Cre10g0602 526 MobiDBLite consensus disorder prediction 429 451 - -
Cre10g0602 526 SUPERFAMILY PP2C-like 82 406 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2054 Cre-Chr2:34011208 Cre10g0602 Cre-Chr10:5556265 2.40E-113 dispersed
Cre05g1940 Cre-Chr5:31583701 Cre10g0602 Cre-Chr10:5556265 1.10E-72 dispersed
Cre06g1248 Cre-Chr6:6383007 Cre10g0602 Cre-Chr10:5556265 5.80E-83 dispersed
Cre10g0602 Cre-Chr10:5556265 Cre11g1393 Cre-Chr11:17786343 3.60E-131 dispersed
Cre10g0602 Cre-Chr10:5556265 Cre02g0457 Cre-Chr2:1823589 4.50E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0602 - - - 0.0