Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0643 ATGTCATACATCGTATACCTTGGATTGCATTCTCATGGTTTGAATCCTTCCTCATTGGATCTTCAACATGTAACAGAATCTCATTATGATTTACTGGGGTCGGTGTTAGGAAGCAAAGAGATAGCCAAGGAAGCTATTGTCTACTCATACAACAGATATATCAATGGGTTCGCTGCAATGCTCAACGAGAAACAGGCGGCAGATCTTGCAAGATTTCCAAGTGTGATTTCGGTTTTTGAAAGTAAGGAAAGACAATTGCACACAACAAGATCATGGGATTTTCTTGGATTAGAAAGACAAGAAGCAGTTCCTTCAGACTCCATTTGGAATGTTACGAGGTTTGGTGATGATGCAATTATAGCCAACTTTGACACAGGTGTTTGGCCAGAATCTAAGAGCTTCAGTGACGAAGGATATGGGCCTGTCCCTTCAAGGTGGTTCGGCAGTTGTCAAAGTGACACTGACCCCAACTTTCACTGCAACAGGAAGCTAATTGGAGCAAGATTCTTTAACAAAGCATATGGTCCGCTCAATGTCAGCTTTAATTCTTCAAGGGACCATCATGGCCACGGAACCCACACTTTATCCACAGCTGGTGGCAATTTTGTCTCTGGAGCTAATGTTTTGGCAATGGCAATGGAACGGCGAAAGGTGGCTCGCCTCGAGCCCGTGTTGCATCCTACAAGCGATGGAGTTGATGTCATCTCAGTTTCTCTAGGTGCAATTTCCACAGACTTTCTAAACGATGGACTATCCATAGGAGCCTTCCATGCAGTTCAGCAAGGCATCGTTGTTGTTTGCTCAGCTGGGAACTCAGGACCAGCTCCTGGATCCGTAGCAAATGTATCGCCATGGATGTTAACTGTTGGAGCTAGTACCATTGATAGGGATTTCACCAATTTCGTGGTCCTTGGGAACAAGAAGAGATTCAAGGGTGCAAGCCTTTCTTCTAAAGCATTGCCAGTTAACAAGTTCTACCCCTTAATTAATGCCGTGGATGCGAAAGCCAACAATGTTACTAACCGTGATGCACGAACTTATAAAGAACTCTTACACAGGGAAATTTGTGATGAGGGAATGCTTGATTTCACGAAATTGAATGGGAAGATTGTGGTTTGCCTTCGAGGGGTTAACTCAAGAGTGGCCAAAGGTTATGTAGCTGCTCAGGCAGGGGCTGTTGGGATGATTCTGGTTAACGATGAGCTAAGTGGGAATGAGATTTTAGCTGATGCACACATCATTCCAGCTTCCAATGTAAACTATAATGATAGCATATCCATCTCCCAATATATCAGCTCTACAACGACACCAATGGCTTACATAAGTCCTGCGAGGACAACACTTGGAGTCAAGCCCGCCCCAACAATGGCTGATTTCTCAGGAAGAGGCCCTAATACAATCGAGGAGTCAATCCTCAAGCCAGATGTAACAGCACCAGGTGTGAATATAATGGCAGCTTACCCCAGTGGAATACCGTTGTCAAATATACCAGTTGATGATCGTCGAGTTCCTTTTAAGGCTATGAATGAAGATGGTACTGAGCCTTTCACCCTCTTTCTAATGACTTGGAGAGCTGATCTTATAAATGCACTTTAA 1596 44.11 MSYIVYLGLHSHGLNPSSLDLQHVTESHYDLLGSVLGSKEIAKEAIVYSYNRYINGFAAMLNEKQAADLARFPSVISVFESKERQLHTTRSWDFLGLERQEAVPSDSIWNVTRFGDDAIIANFDTGVWPESKSFSDEGYGPVPSRWFGSCQSDTDPNFHCNRKLIGARFFNKAYGPLNVSFNSSRDHHGHGTHTLSTAGGNFVSGANVLAMAMERRKVARLEPVLHPTSDGVDVISVSLGAISTDFLNDGLSIGAFHAVQQGIVVVCSAGNSGPAPGSVANVSPWMLTVGASTIDRDFTNFVVLGNKKRFKGASLSSKALPVNKFYPLINAVDAKANNVTNRDARTYKELLHREICDEGMLDFTKLNGKIVVCLRGVNSRVAKGYVAAQAGAVGMILVNDELSGNEILADAHIIPASNVNYNDSISISQYISSTTTPMAYISPARTTLGVKPAPTMADFSGRGPNTIEESILKPDVTAPGVNIMAAYPSGIPLSNIPVDDRRVPFKAMNEDGTEPFTLFLMTWRADLINAL 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6025460 6029724 + CrPI670011_10g006430.1 Cre10g0643 509945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0643 531 CDD PA_subtilisin_like 302 441 - -
Cre10g0643 531 Gene3D Peptidase S8/S53 domain 117 213 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre10g0643 531 FunFam Subtilisin-like protease SBT5.3 1 87 - -
Cre10g0643 531 Pfam Peptidase inhibitor I9 2 87 IPR010259 -
Cre10g0643 531 Gene3D - 295 448 - -
Cre10g0643 531 SUPERFAMILY Subtilisin-like 86 490 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre10g0643 531 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 493 IPR045051 -
Cre10g0643 531 FunFam subtilisin-like protease SBT1.5 295 448 - -
Cre10g0643 531 Pfam PA domain 349 423 IPR003137 -
Cre10g0643 531 Pfam Subtilase family 116 486 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre10g0643 531 SUPERFAMILY PA domain 363 405 IPR046450 -
Cre10g0643 531 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 87 IPR037045 -
Cre10g0643 531 Gene3D Peptidase S8/S53 domain 229 507 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre10g0643 531 ProSiteProfiles Serine proteases, subtilase domain profile. 91 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g0643 Cre-Chr10:6025460 Cre10g2028 Cre-Chr10:34920218 1.50E-20 dispersed
Cre10g0643 Cre-Chr10:6025460 Cre10g0644 Cre-Chr10:6034580 4.00E-191 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0643 - - - 0.0