Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0651 ATGACTACCACGGCGGAGGAAACAACCATCACTTTCTCCTCCGATCATGGCGCCGCCCAAGAACAACAACACTACGCTTACGCTATGCAGCTGGTTACCTCATCGGTGCTGCCAATGACACTCCAAGCAGCGTTCGAGCTCGGTGTGTTCGAGATCTTGGCAAAGGCTGGGGATGGGGCCAAGCTCTCTCCGCCAGAGATAGCGGCTGAGATAACTACGACAAACCCGGATGCAGCGTCGATGATTGATCGGATGTTGAGGCTTCTCGCCAGCCACTCGGTGGTGGGATGCTCTGTGGGATTTGATGAAGATGGGAAAATGCAGAGACTTTATAGCCTTACGCCAGTTTCTAAGTATTATGTTCGTAATCAAGATGGTGTCTCGTTGGGTCCAACTTTGTCGTTGATTCAAGATAAAGTCTTTCTCCATAGCTGGAGTGAGCTAAAGAATGCAGTTATTGAAGGAGGAGTTCCTTTCAATAGGGCTCATGGGGGAGTTCATGCCTTTGAATATCCAGGCTTGGATCCAAGATTTAACCAAGTTTTCAATGCTGCAATGATAAATCACACCACTATAGCCATCAAGAAAATTGTCAAATCCTACAAAGGCTTTGAAAACATCAAGCAACTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAAATCATCACTTCTACATACCCTTCCATCAAAGGCATCAACTTCGACTTACCTCATGTTATTCGCGATGCCCCTCCCTATCCTGGTGTAGAACATGTGGGAGGAGACATGTTTGAGAAAGTTCCAAAGGGAGATGCTGTTTTCATGAAGTGGATACTTCATGATTGGAGTGACGAGCATTGTGTAAAGTTATTGAAAAATTGCTACGTTGCGATCCCAAATGAAGGAAAGGTGGTCATAGTGGACTCAGTGGTTCCAACAGTACCTGAAACCACAGATGTAACAAAATGCATTGCCCAAGGCGATGTGCTTATGATGACTCAAAATCCAGGAGGAAAGGAGCGAACTCGAGATGAATTCGAGGCCCTCGCAACCAAAGCTGGGTTTAAACATGTCATATTCCAGTGCTTTGTGTCTAATCTCTGGGTTATAGAGTTTCTTAAAAATTAA 1113 45.73 MTTTAEETTITFSSDHGAAQEQQHYAYAMQLVTSSVLPMTLQAAFELGVFEILAKAGDGAKLSPPEIAAEITTTNPDAASMIDRMLRLLASHSVVGCSVGFDEDGKMQRLYSLTPVSKYYVRNQDGVSLGPTLSLIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPGLDPRFNQVFNAAMINHTTIAIKKIVKSYKGFENIKQLVDVGGGLGVTLQIITSTYPSIKGINFDLPHVIRDAPPYPGVEHVGGDMFEKVPKGDAVFMKWILHDWSDEHCVKLLKNCYVAIPNEGKVVIVDSVVPTVPETTDVTKCIAQGDVLMMTQNPGGKERTRDEFEALATKAGFKHVIFQCFVSNLWVIEFLKN 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6161081 6163420 - CrPI670011_10g006510.1 Cre10g0651 509953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0651 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 369 IPR016461 GO:0008168(InterPro)
Cre10g0651 370 PANTHER O-METHYLTRANSFERASE 24 356 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cre10g0651 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 367 IPR029063 -
Cre10g0651 370 SUPERFAMILY Winged helix DNA-binding domain 20 123 IPR036390 -
Cre10g0651 370 Gene3D - 6 120 IPR036388 -
Cre10g0651 370 FunFam Caffeic acid O-methyltransferase 121 369 - -
Cre10g0651 370 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Cre10g0651 370 Pfam O-methyltransferase domain 145 351 IPR001077 GO:0008171(InterPro)
Cre10g0651 370 FunFam Caffeic acid 3-O-methyltransferase 5 120 - -
Cre10g0651 370 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983(InterPro)
Cre10g0651 370 PIRSF O-mtase 6 369 IPR016461 GO:0008168(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g2082 Cre-Chr7:36349681 Cre10g0651 Cre-Chr10:6161081 1.70E-116 dispersed
Cre10g0651 Cre-Chr10:6161081 Cre10g1456 Cre-Chr10:28374685 1.60E-29 dispersed
Cre10g0650 Cre-Chr10:6148194 Cre10g0651 Cre-Chr10:6161081 5.80E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0651 K13066 - csv:101214916 586.645