Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0673 ATGACCCCAAAAAATCTCCTTGTTTTTTCCCTTTTCCTGTTTCTCTTCACTCCTCCAAGAACTGAGTGTATTGGCTTCGATTTCAGTTCTTTCAACATCAGAAACCTCACTCTCCTCGGCGATTCCCACCTCCGCGATGGTGTTATCGGCCTCACCAAAGAGCTCGGAGTTCCTTCCTCGAGCGCCGGCGCCGTAATTTACAACAATCCAATCGGATTCTACGACGCCGATGCCAACATCACTGCCTCCTTCTCTACAAGATTCTCTTTCTCCATCACCAACATTAACCCCACTTCCTCCGGCGATGGCCTTTCATTTTTCCTCTCCCCCGATAACCAAACCCTCGGCAGCCCCGGTGGGTATTTGGGTCTCGTCAATTCTTCCCAATTGACCAAGAACAAGTTTCTGGCGGTTGAATTTGATACACGGCTTGATTCTGTCTTCAACGATCCTAATGCCCACCATGTTGGCTTCGACATTGAGAGCTTGATTTCGATCAAGACGGCTAACCCTGCTTCTCAAGGTGTAAATCTCAAGAGTGGGAAGTCGATTACGGCTTGGATTGAGTACAAGAATGAGGAAAATAGGTTGAGGGTTTTCTTGAGTAATTCTGGTTTGAAACCTTCCAAGGCGCTTCTCGACGTCGGTGTCGATCTTTCGAACTATCTTAAGGAGGTTAGGTATGTCGGGTTTTCCGGTTCGACTGAAGGGAGTACTGAGCTTCATTTGATTGAGAGTTGGAGTTTTAATACTTCTGGGTTTGTACCTGCTAGGCCTAGATTTAACCCTCATAATGTTTCTGATAGCTCTGTGATTGTCTCACCTAATATTTCTATATCTGATTCTGGTAATGCTCATCACAATAGACTCGGGTTGGGTCTCGGGATCGCCGGGCCGGCTTTCTTTTGTGCCGTGATTCTTGTGTTTGGTTTCTTTTCACTTGAGAAATGGAGAAAGATTAGGACTCAGAAAAGCATAAAGGCAGAGCTTTTGACAGGTCCTAGAGAGTTTAGTTATAGAGAACTAAAGACGGCCACAAAAGGATTTCATTCCAGTAGGATCGTTGGCAATGGGGCTTTTGGGACAGTCTATAAAGCTTTTTTCATCTCATCCGGAACCATTTCTGCGGTTAAAAGATCGAAGCATTCTCACGAAGGGAAGACCGAGTTCCTAGCCGAGTTGTCGATCATAGCTCGGTTGAGGCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGCGTTGAGAAAGGTGAATTGCTTCTCGTTTATGACTTTATGCCGAACGGGAGCCTTGATAGGCTGCTTTACCAAGAATCTGGAGAAGCTAGCTTGTTAAACTGGTCTCACAGATACAATGTTGCTGTTGGATTGGCATCTGTGCTGACATATCTACATCAGGAATGTGAGCAGCAAGTCATCCACAGAGATATAAAGACAGGTAACGTACTGCTGGACGGGAACTTCAATGCAAGATTGGGCGATTTTGGATTGGCGAAGCTCATGGATCATGACAAGAGCCCGGTTTCGACTCTAACTGCAGGAACAATGGGATACCTTGCACCTGAGTATCTTCAATATGGGAAAGCGACTGAGAAAACTGACGTCTTCAGCTATGGAGTGGTTATCCTTGAAGTGACGTGTGGGAGGAGGCCGATTGAAAGAGAACCAGGTACTCAAAAGATGGTCAATCTGGTAGATTGGGTTTGGGGATTGCATTCTCAAGGCAAGATCATTGAAGCAGCTGATAAAAGGTTGAACGGAGAGTTCAGGGAAGAAGAAATGAGGAAGCTCTTACTTGTCGGACTGAGCTGTGCAAACCCGGATAGCTCGGCAAGACCTTCGATGAGGAAGGTCCTACAGATTCTCAACAATGAGGCAGAGCCAGTGTTCGTGCCAAAAATGAAGCCTAGTCTTACATTTTCTTGTGGCTTTTCACTGACTGTGGATGACATTATAATAGAGGAAGAAGGTGGAGGAAAGTGGGAATCTTCAAAGACAACCATTGTCCAAATAGACTGA 2016 45.73 MTPKNLLVFSLFLFLFTPPRTECIGFDFSSFNIRNLTLLGDSHLRDGVIGLTKELGVPSSSAGAVIYNNPIGFYDADANITASFSTRFSFSITNINPTSSGDGLSFFLSPDNQTLGSPGGYLGLVNSSQLTKNKFLAVEFDTRLDSVFNDPNAHHVGFDIESLISIKTANPASQGVNLKSGKSITAWIEYKNEENRLRVFLSNSGLKPSKALLDVGVDLSNYLKEVRYVGFSGSTEGSTELHLIESWSFNTSGFVPARPRFNPHNVSDSSVIVSPNISISDSGNAHHNRLGLGLGIAGPAFFCAVILVFGFFSLEKWRKIRTQKSIKAELLTGPREFSYRELKTATKGFHSSRIVGNGAFGTVYKAFFISSGTISAVKRSKHSHEGKTEFLAELSIIARLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDRLLYQESGEASLLNWSHRYNVAVGLASVLTYLHQECEQQVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVTCGRRPIEREPGTQKMVNLVDWVWGLHSQGKIIEAADKRLNGEFREEEMRKLLLVGLSCANPDSSARPSMRKVLQILNNEAEPVFVPKMKPSLTFSCGFSLTVDDIIIEEEGGGKWESSKTTIVQID 671
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 6374958 6376973 - CrPI670011_10g006730.1 Cre10g0673 509975
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0673 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 257 IPR013320 -
Cre10g0673 671 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Cre10g0673 671 Pfam Legume lectin domain 25 256 IPR001220 GO:0030246(InterPro)
Cre10g0673 671 PANTHER - 38 631 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cre10g0673 671 FunFam L-type lectin-domain containing receptor kinase VIII.1 425 639 - -
Cre10g0673 671 CDD lectin_legume_LecRK_Arcelin_ConA 26 253 IPR001220 GO:0030246(InterPro)
Cre10g0673 671 ProSitePatterns Legume lectins beta-chain signature. 136 142 IPR019825 -
Cre10g0673 671 FunFam L-type lectin-domain containing receptor kinase VIII.1 22 262 - -
Cre10g0673 671 Gene3D Phosphorylase Kinase; domain 1 312 424 - -
Cre10g0673 671 Gene3D - 22 258 - -
Cre10g0673 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g0673 671 Gene3D Transferase(Phosphotransferase) domain 1 425 640 - -
Cre10g0673 671 FunFam L-type lectin-domain containing receptor kinase VIII.1 313 424 - -
Cre10g0673 671 SMART serkin_6 349 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0673 671 Pfam Protein kinase domain 349 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0673 671 CDD STKc_IRAK 355 623 - -
Cre10g0673 671 ProSiteProfiles Protein kinase domain profile. 349 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0673 671 SUPERFAMILY Protein kinase-like (PK-like) 332 642 IPR011009 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0615 Cre-Chr8:19077930 Cre10g0673 Cre-Chr10:6374958 2.80E-128 dispersed
Cre10g0673 Cre-Chr10:6374958 Cre10g2156 Cre-Chr10:36108561 8.20E-173 dispersed
Cre10g0673 Cre-Chr10:6374958 Cre10g2241 Cre-Chr10:36800090 9.20E-116 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64449 PF00069 Pkinase 5.50E-50 CL0016 Cre PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0673 - - - 0.0