Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g0673 | ATGACCCCAAAAAATCTCCTTGTTTTTTCCCTTTTCCTGTTTCTCTTCACTCCTCCAAGAACTGAGTGTATTGGCTTCGATTTCAGTTCTTTCAACATCAGAAACCTCACTCTCCTCGGCGATTCCCACCTCCGCGATGGTGTTATCGGCCTCACCAAAGAGCTCGGAGTTCCTTCCTCGAGCGCCGGCGCCGTAATTTACAACAATCCAATCGGATTCTACGACGCCGATGCCAACATCACTGCCTCCTTCTCTACAAGATTCTCTTTCTCCATCACCAACATTAACCCCACTTCCTCCGGCGATGGCCTTTCATTTTTCCTCTCCCCCGATAACCAAACCCTCGGCAGCCCCGGTGGGTATTTGGGTCTCGTCAATTCTTCCCAATTGACCAAGAACAAGTTTCTGGCGGTTGAATTTGATACACGGCTTGATTCTGTCTTCAACGATCCTAATGCCCACCATGTTGGCTTCGACATTGAGAGCTTGATTTCGATCAAGACGGCTAACCCTGCTTCTCAAGGTGTAAATCTCAAGAGTGGGAAGTCGATTACGGCTTGGATTGAGTACAAGAATGAGGAAAATAGGTTGAGGGTTTTCTTGAGTAATTCTGGTTTGAAACCTTCCAAGGCGCTTCTCGACGTCGGTGTCGATCTTTCGAACTATCTTAAGGAGGTTAGGTATGTCGGGTTTTCCGGTTCGACTGAAGGGAGTACTGAGCTTCATTTGATTGAGAGTTGGAGTTTTAATACTTCTGGGTTTGTACCTGCTAGGCCTAGATTTAACCCTCATAATGTTTCTGATAGCTCTGTGATTGTCTCACCTAATATTTCTATATCTGATTCTGGTAATGCTCATCACAATAGACTCGGGTTGGGTCTCGGGATCGCCGGGCCGGCTTTCTTTTGTGCCGTGATTCTTGTGTTTGGTTTCTTTTCACTTGAGAAATGGAGAAAGATTAGGACTCAGAAAAGCATAAAGGCAGAGCTTTTGACAGGTCCTAGAGAGTTTAGTTATAGAGAACTAAAGACGGCCACAAAAGGATTTCATTCCAGTAGGATCGTTGGCAATGGGGCTTTTGGGACAGTCTATAAAGCTTTTTTCATCTCATCCGGAACCATTTCTGCGGTTAAAAGATCGAAGCATTCTCACGAAGGGAAGACCGAGTTCCTAGCCGAGTTGTCGATCATAGCTCGGTTGAGGCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGCGTTGAGAAAGGTGAATTGCTTCTCGTTTATGACTTTATGCCGAACGGGAGCCTTGATAGGCTGCTTTACCAAGAATCTGGAGAAGCTAGCTTGTTAAACTGGTCTCACAGATACAATGTTGCTGTTGGATTGGCATCTGTGCTGACATATCTACATCAGGAATGTGAGCAGCAAGTCATCCACAGAGATATAAAGACAGGTAACGTACTGCTGGACGGGAACTTCAATGCAAGATTGGGCGATTTTGGATTGGCGAAGCTCATGGATCATGACAAGAGCCCGGTTTCGACTCTAACTGCAGGAACAATGGGATACCTTGCACCTGAGTATCTTCAATATGGGAAAGCGACTGAGAAAACTGACGTCTTCAGCTATGGAGTGGTTATCCTTGAAGTGACGTGTGGGAGGAGGCCGATTGAAAGAGAACCAGGTACTCAAAAGATGGTCAATCTGGTAGATTGGGTTTGGGGATTGCATTCTCAAGGCAAGATCATTGAAGCAGCTGATAAAAGGTTGAACGGAGAGTTCAGGGAAGAAGAAATGAGGAAGCTCTTACTTGTCGGACTGAGCTGTGCAAACCCGGATAGCTCGGCAAGACCTTCGATGAGGAAGGTCCTACAGATTCTCAACAATGAGGCAGAGCCAGTGTTCGTGCCAAAAATGAAGCCTAGTCTTACATTTTCTTGTGGCTTTTCACTGACTGTGGATGACATTATAATAGAGGAAGAAGGTGGAGGAAAGTGGGAATCTTCAAAGACAACCATTGTCCAAATAGACTGA | 2016 | 45.73 | MTPKNLLVFSLFLFLFTPPRTECIGFDFSSFNIRNLTLLGDSHLRDGVIGLTKELGVPSSSAGAVIYNNPIGFYDADANITASFSTRFSFSITNINPTSSGDGLSFFLSPDNQTLGSPGGYLGLVNSSQLTKNKFLAVEFDTRLDSVFNDPNAHHVGFDIESLISIKTANPASQGVNLKSGKSITAWIEYKNEENRLRVFLSNSGLKPSKALLDVGVDLSNYLKEVRYVGFSGSTEGSTELHLIESWSFNTSGFVPARPRFNPHNVSDSSVIVSPNISISDSGNAHHNRLGLGLGIAGPAFFCAVILVFGFFSLEKWRKIRTQKSIKAELLTGPREFSYRELKTATKGFHSSRIVGNGAFGTVYKAFFISSGTISAVKRSKHSHEGKTEFLAELSIIARLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDRLLYQESGEASLLNWSHRYNVAVGLASVLTYLHQECEQQVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVILEVTCGRRPIEREPGTQKMVNLVDWVWGLHSQGKIIEAADKRLNGEFREEEMRKLLLVGLSCANPDSSARPSMRKVLQILNNEAEPVFVPKMKPSLTFSCGFSLTVDDIIIEEEGGGKWESSKTTIVQID | 671 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6374958 | 6376973 | - | CrPI670011_10g006730.1 | Cre10g0673 | 509975 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g0673 | 671 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 23 | 257 | IPR013320 | - | |
Cre10g0673 | 671 | ProSitePatterns | Protein kinases ATP-binding region signature. | 355 | 378 | IPR017441 | GO:0005524(InterPro) | |
Cre10g0673 | 671 | Pfam | Legume lectin domain | 25 | 256 | IPR001220 | GO:0030246(InterPro) | |
Cre10g0673 | 671 | PANTHER | - | 38 | 631 | IPR050528 | GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER) | |
Cre10g0673 | 671 | FunFam | L-type lectin-domain containing receptor kinase VIII.1 | 425 | 639 | - | - | |
Cre10g0673 | 671 | CDD | lectin_legume_LecRK_Arcelin_ConA | 26 | 253 | IPR001220 | GO:0030246(InterPro) | |
Cre10g0673 | 671 | ProSitePatterns | Legume lectins beta-chain signature. | 136 | 142 | IPR019825 | - | |
Cre10g0673 | 671 | FunFam | L-type lectin-domain containing receptor kinase VIII.1 | 22 | 262 | - | - | |
Cre10g0673 | 671 | Gene3D | Phosphorylase Kinase; domain 1 | 312 | 424 | - | - | |
Cre10g0673 | 671 | Gene3D | - | 22 | 258 | - | - | |
Cre10g0673 | 671 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 471 | 483 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g0673 | 671 | Gene3D | Transferase(Phosphotransferase) domain 1 | 425 | 640 | - | - | |
Cre10g0673 | 671 | FunFam | L-type lectin-domain containing receptor kinase VIII.1 | 313 | 424 | - | - | |
Cre10g0673 | 671 | SMART | serkin_6 | 349 | 629 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g0673 | 671 | Pfam | Protein kinase domain | 349 | 619 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g0673 | 671 | CDD | STKc_IRAK | 355 | 623 | - | - | |
Cre10g0673 | 671 | ProSiteProfiles | Protein kinase domain profile. | 349 | 629 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g0673 | 671 | SUPERFAMILY | Protein kinase-like (PK-like) | 332 | 642 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0615 | Cre-Chr8:19077930 | Cre10g0673 | Cre-Chr10:6374958 | 2.80E-128 | dispersed | |
Cre10g0673 | Cre-Chr10:6374958 | Cre10g2156 | Cre-Chr10:36108561 | 8.20E-173 | dispersed | |
Cre10g0673 | Cre-Chr10:6374958 | Cre10g2241 | Cre-Chr10:36800090 | 9.20E-116 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64449 | PF00069 | Pkinase | 5.50E-50 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g0673 | - | - | - | 0.0 |