Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g0688 | ATGATGCCTAGTATGATGACAGAGTCATCAGAGAAGGAGACAGAGGCATTTGTAGAGGTGGATCCGACGGGTCGATATGGGCGGTACGGGGAGCTTCTGGGGACAGGGGCGGTGAAGAAAGTGTACAGAGCATTTGATCAAGAAGAAGGAATAGAGGTAGCTTGGAACCAAGTGAAACTAAGGAGTTTTTCAAATGATCCATCCATGATAGATAGGTTGTATTCAGAGGTGAGATTGTTAAGAACCTTAAAGAACAACAACATAATTGCCTTGTATGATGTTTGGCTTGACAAACTTCATGGAACCTTAAATTTCATTACTGAGGTTTGTACAAGTGGAAACCTTAGAGAGTACAGGAAGAAGCATAGGCAAGTCTCTTTGAAAGCTTTGAAGAAATGGTCCAAACAAATTCTTAAGGGTTTGCATTATTTGCATACTCATGACCCTTGTGTTATTCATAGAGATCTCAACTGTAGCAACCTCTTTGTCAATGGCAATGTTGGCCAGGTAAAGATTGGTGACTTGGGTTTAGCAGCAACCGTGAGAAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCAGAATTCATGGCACCTGAGCTATATGAAGAGCATTACACCGAGCTTGTGGACATATATTCATTTGGAATGTGTTTGCTTGAATTAGTCACTTTGGAAATTCCCTATAGTGAATGTGACAATGTTGCCAAAATCTATAAAAAAGTCTCCTCAGGCATCAAGCCTCAAGCCCTTGACAAGGTCAAGGACCCTGAAGTCAAGGCTTTCATCGAGAATTGCCTTGCCGAATCCCGAGCTCGACCCTCAGCTGCTGACCTCCTCCGCCACCCCTTCTTCGGAGAAATTGATGATGACGAAAACGACGACAACAATGATCATTAA | 900 | 43.0 | MMPSMMTESSEKETEAFVEVDPTGRYGRYGELLGTGAVKKVYRAFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVRLLRTLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWSKQILKGLHYLHTHDPCVIHRDLNCSNLFVNGNVGQVKIGDLGLAATVRKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVSSGIKPQALDKVKDPEVKAFIENCLAESRARPSAADLLRHPFFGEIDDDENDDNNDH | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6547289 | 6549630 | + | CrPI670011_10g006880.1 | Cre10g0688 | 509990 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g0688 | 299 | FunFam | Probable serine/threonine-protein kinase WNK1 | 11 | 108 | - | - | |
Cre10g0688 | 299 | SUPERFAMILY | Protein kinase-like (PK-like) | 29 | 290 | IPR011009 | - | |
Cre10g0688 | 299 | CDD | STKc_WNK | 25 | 285 | - | - | |
Cre10g0688 | 299 | Gene3D | Phosphorylase Kinase; domain 1 | 10 | 108 | - | - | |
Cre10g0688 | 299 | FunFam | probable serine/threonine-protein kinase WNK9 | 110 | 291 | - | - | |
Cre10g0688 | 299 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 290 | - | - | |
Cre10g0688 | 299 | ProSiteProfiles | Protein kinase domain profile. | 27 | 285 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g0688 | 299 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 9 | 286 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Cre10g0688 | 299 | PIRSF | TyrPK_CSF1-R | 26 | 129 | - | - | |
Cre10g0688 | 299 | PIRSF | TyrPK_CSF1-R | 119 | 282 | - | - | |
Cre10g0688 | 299 | Pfam | Protein kinase domain | 30 | 285 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g2350 | Cre-Chr9:42767772 | Cre10g0688 | Cre-Chr10:6547289 | 1.10E-97 | dispersed | |
Cre10g0688 | Cre-Chr10:6547289 | Cre05g1949 | Cre-Chr5:31636477 | 4.10E-23 | dispersed | |
Cre10g0688 | Cre-Chr10:6547289 | Cre02g1958 | Cre-Chr2:32971515 | 2.90E-101 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64450 | PF00069 | Pkinase | 2.10E-51 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g0688 | K08867 | - | csv:101221172 | 553.903 |