Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0693 ATGGCTCTACAGAGTTTTGGTTCATTAATCAAAGAGCCTCGTTTTGTAGTTAGAAAGTTTCTTGCTAGACCTCAACATGAAGGCCTTGGCGCTGTTGTAAGAAGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCATTCCTTGTTCTCGATGAGTTTTCTGTTACTGCACCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAAACTGTCACTTACATGTTAGAGGGAGCAATGACACATGAAGATTTCAAAGGGCATAAAGGAAGAATTGGAGCTGGTGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTTCACTCTGAAATGCCTGCATCCCATGGCACCCAACATGGCTTACAACTTTGGATCAATCTTTCCTCCAAACACAAAATGATTGAGCCAAGGTATCAAGAAATACACAATGAGGACGTAGTAGAAGCTACAAGAGAAGGAGTGAAAGTGAGAGTGATAGCAGGGGAAGCCTTGGGAGCAAAATCCCCAATCTACACCGAAACTCCAACCATGTACTTGGACTTCACTCTCGGCCCGGGATCTCGCATCGAGCAGCCGATCCCGGTGGGGTGGAATGCGTTCGTGTACGTACTAGAAGGCGAGGGCGGAGTGTTCGGGAGCATGAAATCGATGCCGATTACGCCACATCACCTTCTTTTGTTGGGGAATGGGGATGGGTTGGAGGCTTGGAACAAGTCCTCCTCCAAAGCCCTAAGGTTCATATTGGTTGGGGGTCAGCCATTGAATGAGAGCGTTGTGCAGTTGGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACCATAGAGGATTTTGAGAATTGTACAAATGGATTTGAGAGAGCAAGGCATTGGAGTTCACAACCTTAA 894 46.31 MALQSFGSLIKEPRFVVRKFLARPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLEGAMTHEDFKGHKGRIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEIHNEDVVEATREGVKVRVIAGEALGAKSPIYTETPTMYLDFTLGPGSRIEQPIPVGWNAFVYVLEGEGGVFGSMKSMPITPHHLLLLGNGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCTNGFERARHWSSQP 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6607628 6610244 - CrPI670011_10g006930.1 Cre10g0693 509995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0693 297 Gene3D Jelly Rolls 148 255 IPR014710 -
Cre10g0693 297 Pfam Pirin 33 126 IPR003829 -
Cre10g0693 297 FunFam pirin 27 164 - -
Cre10g0693 297 PANTHER PIRIN-RELATED 11 296 IPR012093 -
Cre10g0693 297 CDD cupin_pirin_C 176 254 - -
Cre10g0693 297 Pfam Pirin C-terminal cupin domain 179 286 IPR008778 -
Cre10g0693 297 SUPERFAMILY RmlC-like cupins 14 295 IPR011051 -
Cre10g0693 297 Gene3D Jelly Rolls 27 281 IPR014710 -
Cre10g0693 297 CDD cupin_pirin_N 31 128 - -
Cre10g0693 297 PIRSF Pirin 12 294 IPR012093 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0379 Cre-Chr1:3170587 Cre10g0693 Cre-Chr10:6607628 3.70E-133 dispersed
Cre07g2013 Cre-Chr7:35689984 Cre10g0693 Cre-Chr10:6607628 1.40E-109 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0693 K06911 - csv:101204082 536.184