Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g0749 | ATGTTAAATAGTTTTTTTCTTTATGTGGGTGTTGGAAACAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTGCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGGAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA | 417 | 44.12 | MLNSFFLYVGVGNSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF | 138 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7294473 | 7294889 | - | CrPI670011_10g007490.1 | Cre10g0749 | 510051 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g0749 | 138 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 27 | 138 | - | GO:0003723(PANTHER) | |
Cre10g0749 | 138 | Pfam | Translation initiation factor SUI1 | 53 | 127 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cre10g0749 | 138 | SUPERFAMILY | eIF1-like | 25 | 138 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cre10g0749 | 138 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 56 | 126 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cre10g0749 | 138 | FunFam | Eukaryotic translation initiation factor SUI1 | 28 | 138 | - | - | |
Cre10g0749 | 138 | Gene3D | - | 17 | 138 | - | - | |
Cre10g0749 | 138 | CDD | eIF1_SUI1 | 54 | 137 | IPR005874 | GO:0003743(InterPro) | |
Cre10g0749 | 138 | NCBIfam | translation initiation factor SUI1 | 31 | 138 | IPR005874 | GO:0003743(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g1031 | Cre-Chr9:10561793 | Cre10g0749 | Cre-Chr10:7294473 | 1.00E-56 | transposed | |
Cre10g0749 | Cre-Chr10:7294473 | Cre02g0516 | Cre-Chr2:2236454 | 5.50E-39 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g0749 | K03113 | - | csv:101214921 | 228.794 |