Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0749 ATGTTAAATAGTTTTTTTCTTTATGTGGGTGTTGGAAACAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTGCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGGAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA 417 44.12 MLNSFFLYVGVGNSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7294473 7294889 - CrPI670011_10g007490.1 Cre10g0749 510051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0749 138 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 27 138 - GO:0003723(PANTHER)
Cre10g0749 138 Pfam Translation initiation factor SUI1 53 127 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre10g0749 138 SUPERFAMILY eIF1-like 25 138 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre10g0749 138 ProSiteProfiles Translation initiation factor SUI1 family profile. 56 126 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre10g0749 138 FunFam Eukaryotic translation initiation factor SUI1 28 138 - -
Cre10g0749 138 Gene3D - 17 138 - -
Cre10g0749 138 CDD eIF1_SUI1 54 137 IPR005874 GO:0003743(InterPro)
Cre10g0749 138 NCBIfam translation initiation factor SUI1 31 138 IPR005874 GO:0003743(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g1031 Cre-Chr9:10561793 Cre10g0749 Cre-Chr10:7294473 1.00E-56 transposed
Cre10g0749 Cre-Chr10:7294473 Cre02g0516 Cre-Chr2:2236454 5.50E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0749 K03113 - csv:101214921 228.794