Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0763 ATGTATAAGTGTGGGTTGAATTTAGGGTTTGGTGTTGCGCAACTGACACCAGAAATTGGGAAGCTCTGGACAGAGACGCGTGAGAAACGCCTAATTTGGCTCAACAAGCTTTCTGAAAATGGCGGAAATAGCCACTCACACCATCCTTCTCAAATTAGCAAATTTGACTCAGTCTCTCTCGATTCCAAACTTGGAGGGTTTCCTACTGCAACAAAGAAGAAAAACAAGCTTCATGAGGAGAAAGTCAATAGGAAGTCTTTGAAAAAGAGCATTAAAGAGTATCATGACACAAAAACTTTAGCCTCATTTGCCAACATTTCCTTTAAATCTGATAGCAGTCGGCGAAGGTACATAACTGAGGAGATAAAAAAGTTAGGAAAAGGAAACATCTCTGCTCAAATTTTTACATTTTGTGAGCTATCTACGGCTACCAATAACTTCAACCACGAAAATCTGTTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGGCGTCATTGAAAGCACACAACAAATAACGGCCGTGAAGCAACTTGACCGAAATGGATTTCAAGGAAACAGAGAATTCCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCTAATCTTGTGAATTTGGTTGGGTATTGTGCTGATGGGGATCAGAGAATTTTGGTTTATGAGTACATGGCTAAAGGTTCCTTGGAGGATCATCTTCTTGATATAGCATCAGATAAGCCACCTCTGGACTGGAAGACAAGGATGAAAATTGCCGAAGGAGCGGCAAAAGGACTTGAATACTTGCACGAAACTGCTAATCCTCCCGTGATATACCGTGATTTCAAAGCTTCAAACATATTGTTGGACGAGGAATTCAATCCAAAGCTCTCTGATTTTGGTCTTGCAAAGTTAGGTCCTACTGGGGACAAATCTCATGTTTCCACTAGGGTGATGGGAACCTATGGTTACTGTGCTCCTGAATATGCACTTACAGGACAATTGACGACGAAATCAGATGTCTATAGTTTCGGTGTCGTGTTTCTGGAGATTATAACTGGAAGAAGGGTTATAGACAATGCAAGACCAACAGCAGAACAAAATTTAATTACTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTTACCCTAATGGCAGATCCAAAGCTAGAAGGAAATTATCCAGTGAAGGCTCTATATCAAGCTTTGGCAGTGGCAGCCATGTGTTTACAAGAGGAAGCGGGTACTCGACCATTGATCAGCGACGTGGTTACGGCCCTTGAATATTTAGCTGCAAACAAGGATGTCGATGCAGACGTAGATGATGAATCAGATTCAGGATCGGTATTGGGATCGGGATCAGGTTCAGCTTCTCCTGATAGAAGTAGTAACAATGGAGATAAAAATGTTGATGTTGAGGGTGATGGGAGGTGA 1416 41.88 MYKCGLNLGFGVAQLTPEIGKLWTETREKRLIWLNKLSENGGNSHSHHPSQISKFDSVSLDSKLGGFPTATKKKNKLHEEKVNRKSLKKSIKEYHDTKTLASFANISFKSDSSRRRYITEEIKKLGKGNISAQIFTFCELSTATNNFNHENLLGEGGFGRVYKGVIESTQQITAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADGDQRILVYEYMAKGSLEDHLLDIASDKPPLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGRRVIDNARPTAEQNLITWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVAAMCLQEEAGTRPLISDVVTALEYLAANKDVDADVDDESDSGSVLGSGSGSASPDRSSNNGDKNVDVEGDGR 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7436416 7440093 + CrPI670011_10g007630.1 Cre10g0763 510065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0763 471 FunFam Serine/threonine-protein kinase PBS1 224 439 - -
Cre10g0763 471 ProSiteProfiles Protein kinase domain profile. 147 424 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0763 471 Gene3D Phosphorylase Kinase; domain 1 106 223 - -
Cre10g0763 471 Gene3D Transferase(Phosphotransferase) domain 1 224 443 - -
Cre10g0763 471 SUPERFAMILY Protein kinase-like (PK-like) 131 419 IPR011009 -
Cre10g0763 471 MobiDBLite consensus disorder prediction 441 459 - -
Cre10g0763 471 Pfam Protein kinase domain 148 417 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0763 471 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524(InterPro)
Cre10g0763 471 FunFam Serine/threonine-protein kinase CDL1-like 118 223 - -
Cre10g0763 471 CDD STKc_IRAK 153 422 - -
Cre10g0763 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g0763 471 PANTHER OS07G0668900 PROTEIN 91 431 - -
Cre10g0763 471 MobiDBLite consensus disorder prediction 432 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g1021 Cre-Chr9:10465024 Cre10g0763 Cre-Chr10:7436416 4.10E-175 dispersed
Cre10g0763 Cre-Chr10:7436416 Cre10g2179 Cre-Chr10:36331013 2.90E-132 dispersed
Cre10g0763 Cre-Chr10:7436416 Cre05g0718 Cre-Chr5:6341480 1.20E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64452 PF00069 Pkinase 9.10E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0763 - - - 0.0