Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0772 ATGCAATTTCCAACGCGAGTTTTTATCTCTGTTTCTTTCCTTATTTCCCTTCTTGTTTTTTCCAATTTTTCTTTTTGTTCTGCACAAGACTATATAATTGGCGGCGGTGGCGGTGGCGGCGGCGACGACGACGACGAGGCGAAGCCAGCGGCGCCACCGCCGGAGCAGAATGACTGTAATGGGATATTCTTGTCCTATACATTTATTTCGCGTGAGAAGGAGCTGCCACGGCTGAAGAACGCGACGGCTCAGTCATGGGCATTCAAGTCGGAGGCGTTGATTCTGAATGCGGGATCGACGGAGCTGAAGGCGTGGAAGATGTTCATCGGATTTCACCACCGGGAAATCCTGGTGTCGGCGGCTGGCGCGGTGGTGATGGATGGGTCGGATTTCCCTGTGGACGTTGGGAATGGAACCACTTTGGCTGGGTACCCCATGACGGATCTGAAAACGTCGATTGAAACAGCGGGAGATATTAATCAGATTCAGGCGACGGTGGAGCTGACCGGAACGCAGTTCGGAATCAAGCCGCCTGGTGTTCCGATGCCAAAGACGATTCGCCTTGCTAACGATGGATTTAAGTGCCCTGCGCCTCGCCGTCGCGGTAAGAGAACAATGCATGTATGCTGCAAAAAGGATCCGAAGTTCAAGGTGAAAGCACCAAAGAAAACCAGATTTTTCCCTCGCCAAAATGGAGATCTCTCACTCACTTATGATATTATGCAAGCTTATGGAAATAACTATCTTGCTCAAGTCACAATCGACAACAACAATCCTCTAGGACGTCTTGATCACTGGAACTTAACTTGGGAATGGATGAGAGGAGAGTTCATTCAAAGCATGAGAGGAGCTTATACTCATACAAGAGATTTATCTCAATGCATTTATGGTCCTGCAGGCCAATACTATCAAGATTTTGACTTCTCTCAAGCCATGAGTTGCGATAAAAGGCCGGTCATTGCCGATCTTCCAGCCGATCGAAAAGACGACGATAAGGTTGGGAAGTTGCCGTATTGCTGTAGGAATGGAAGTTTGTTGCCAACATTGATGGATGAGAGCAAAGCAAGGTCTATTTTTCAATTACAAGTCTATAAGCTTCCACCTGATATGAACCGAACGGCTCTTAATCCACCGCAGAAATGGAAGATCTCGGGCATTCTAAACCCGAAATACGTTTGTGCAGCTCCACTCCGAGTTGAACCGACGGAGTTTCCTGACCCTAGTGGACTTCAGGCAACGAGTACCGCGATTGCAAGTTGGCAAATTGTTTGCAACATTACAAGGCCAAAGGTGAAGCAATCAAAATGCTGTGTTTCATTTTCAGCATATTATAATGACTCTGTAATTCCTTGCAATACTTGTGCCTGTGGTTGTGACAACACTGATACTGATACTTGCAATCCAAATGCACATGCAATGCTGCTCCCTCCAGAAGCACTTTTGGTTCCATTTGTTAACAGGACTGCAAAAGCAAGAGCTTGGGCTAGAATTAAGCATTACCCAAATCCAAAGAAGATGCCTTGTCCTGATAACTGTGGAGTTAGCCTCAATTGGCATATTAACTCTGATTATACCAATGGATGGACTGCAAGATTAACACTTTTCAATTGGGAAGATTATCCATTTGAGGATTGGTTTACTGCTATTCAGTTGAACAAGGCCGGTCGCGGTTACGAAAACGTTTATTCCTTCAACGGAACCCGGCTTCCCAACATAAAAAACACCATCTTCCTCCAAGGTTTGCCTGGTTTAACATACTTGATGGGAGAGGTAAATGGGACCAATCCTAGATCTGATCCAAGAGTTCCAGGGAAGCAACAATCTGTCATTTCTTTCACCAAGAAAGGCCTGCGCGACATCGACATACTAGGAGGCGACGGTTTTCCAATCAAAGTGTTTTTCAATGGCGAAGAATGTGCGCTTCCAAAGGAAATTCCCACAGCAAGTTCAGGCCACCACTCTCGCCACGGTTTCATGCTACTCATCTTCATCTTAGCTCTTACTTTCGCGTTTATAACCGATCGCTTCCATTGA 2034 46.21 MQFPTRVFISVSFLISLLVFSNFSFCSAQDYIIGGGGGGGGDDDDEAKPAAPPPEQNDCNGIFLSYTFISREKELPRLKNATAQSWAFKSEALILNAGSTELKAWKMFIGFHHREILVSAAGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDINQIQATVELTGTQFGIKPPGVPMPKTIRLANDGFKCPAPRRRGKRTMHVCCKKDPKFKVKAPKKTRFFPRQNGDLSLTYDIMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHTRDLSQCIYGPAGQYYQDFDFSQAMSCDKRPVIADLPADRKDDDKVGKLPYCCRNGSLLPTLMDESKARSIFQLQVYKLPPDMNRTALNPPQKWKISGILNPKYVCAAPLRVEPTEFPDPSGLQATSTAIASWQIVCNITRPKVKQSKCCVSFSAYYNDSVIPCNTCACGCDNTDTDTCNPNAHAMLLPPEALLVPFVNRTAKARAWARIKHYPNPKKMPCPDNCGVSLNWHINSDYTNGWTARLTLFNWEDYPFEDWFTAIQLNKAGRGYENVYSFNGTRLPNIKNTIFLQGLPGLTYLMGEVNGTNPRSDPRVPGKQQSVISFTKKGLRDIDILGGDGFPIKVFFNGEECALPKEIPTASSGHHSRHGFMLLIFILALTFAFITDRFH 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7555809 7559505 - CrPI670011_10g007720.1 Cre10g0772 510074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0772 677 MobiDBLite consensus disorder prediction 37 56 - -
Cre10g0772 677 Pfam COBRA-like protein 248 427 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cre10g0772 677 PANTHER COBRA-LIKE PROTEIN 7 11 672 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0778 Cre-Chr5:6858071 Cre10g0772 Cre-Chr10:7555809 7.60E-224 dispersed
Cre05g1566 Cre-Chr5:23716397 Cre10g0772 Cre-Chr10:7555809 8.70E-292 dispersed
Cre10g0772 Cre-Chr10:7555809 Cre07g1947 Cre-Chr7:34884676 1.10E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0772 - - - 0.0