Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g0804 | ATGGCGGAGGAGTTTCAGAGCACTGGAAACTGGTGGGAGGCTTCTAGAAATCGCTACGAAGCCGGAATATCCCCTTCCTCCTCCTCCATCACCACCTTCGTCGACCACTCCGACTCCGCCGCCGCCGCCGCCTCCGATCCCAATTTGCACATCATGGGCTTAGGCCTCGATTGGAATCAACCCCTCTTTAGGGGCGGCGGAGAGAAGGCGGCGGAGGGAAGTTTCCGGTCGATGCTACAGCCGGAAACTATGAATTTAAATATGCAAGAAACAGGGCAGCAGCAGCAGCAGCAGCAACAGATTCAATGGATGAGATCGGAGAAGCTATATTCAGGGGAGTCTCCGGCGACCGAATTTAAGGCAATAAACAGAGGATTTTCATTAGATCATCATCAAGCTCAACCCCAGTTCAGTAGCCCTTCTCACTACAGCTCCGGTGACAGTACCGTCACCAGTTTTCCGATCGACACCGCCGCCAATTTATACGGAAATTCCGCAACATTATTACAAGGCTTATTAGCCAGCGGCGGGGAGCAGCAGCAGCAACAGCAACAACAACAACAAGTCTCAGCGGCTGTAGGTATGAACTACCCTTACAATTCCCATTTCGGAATGAACTCCGGCGAGTTAATGGCGGGAGGAGCGTCGTGGTCGCCGTCTAAAGTGCCTCAGTTTTTAAGAAACTCACCGCCAAAAGGGGCGGCGGCGGCAACTCCACATAGTCAGTTACAATTTTCGAACAACACGGCGTTCTGGAACGCGTCGGATATGAAAGACGTGAGACCCAGTTATTTTCCGGCGTCGTACAACACCGCTGCAGCTTTCGCCGATAAATCAAAGAATATATCGGAGGTTGGTGATTCGGTAACAACAGTAGGAAAAAAAAGTGGAAATGATCACAATCAGCAATCCGCCGCTGCTAAAAGGCCTCGAAATGAAACTCCTTCGCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCGCTCCAACAACTCGTTTCACCTTTCGGAAAGACTGATACAGCCTCAGTGCTGTCTGAAGCAATTGAATACATAAAGTTCCTCCATGAACAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTGCAGTACAGCAACAACATCAGCAGCAGAGATGTGAGAAATCAAAGGAAGGAGAAGGAGGAAAGCAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAAGTACATTTCCAGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGAGGAACCTTCAGATAA | 1308 | 49.31 | MAEEFQSTGNWWEASRNRYEAGISPSSSSITTFVDHSDSAAAAASDPNLHIMGLGLDWNQPLFRGGGEKAAEGSFRSMLQPETMNLNMQETGQQQQQQQQIQWMRSEKLYSGESPATEFKAINRGFSLDHHQAQPQFSSPSHYSSGDSTVTSFPIDTAANLYGNSATLLQGLLASGGEQQQQQQQQQQVSAAVGMNYPYNSHFGMNSGELMAGGASWSPSKVPQFLRNSPPKGAAAATPHSQLQFSNNTAFWNASDMKDVRPSYFPASYNTAAAFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8059872 | 8063853 | - | CrPI670011_10g008040.1 | Cre10g0804 | 510106 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g0804 | 435 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 102 | 414 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Cre10g0804 | 435 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 312 | 361 | IPR011598 | GO:0046983(InterPro) | |
Cre10g0804 | 435 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 322 | 376 | IPR036638 | GO:0046983(InterPro) | |
Cre10g0804 | 435 | MobiDBLite | consensus disorder prediction | 289 | 310 | - | - | |
Cre10g0804 | 435 | Gene3D | - | 322 | 392 | IPR036638 | GO:0046983(InterPro) | |
Cre10g0804 | 435 | CDD | bHLH_AtbHLH_like | 318 | 369 | IPR045239 | - | |
Cre10g0804 | 435 | MobiDBLite | consensus disorder prediction | 289 | 318 | - | - | |
Cre10g0804 | 435 | FunFam | Transcription factor bHLH123 family | 322 | 386 | - | - | |
Cre10g0804 | 435 | SMART | finulus | 323 | 367 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g1007 | Cre-Chr2:7686133 | Cre10g0804 | Cre-Chr10:8059872 | 9.00E-16 | dispersed | |
Cre04g1855 | Cre-Chr4:36242114 | Cre10g0804 | Cre-Chr10:8059872 | 8.60E-56 | dispersed | |
Cre05g2045 | Cre-Chr5:32442787 | Cre10g0804 | Cre-Chr10:8059872 | 6.90E-27 | dispersed | |
Cre07g1674 | Cre-Chr7:32189021 | Cre10g0804 | Cre-Chr10:8059872 | 1.60E-23 | dispersed | |
Cre08g1429 | Cre-Chr8:27268475 | Cre10g0804 | Cre-Chr10:8059872 | 1.20E-20 | dispersed | |
Cre09g0177 | Cre-Chr9:1995004 | Cre10g0804 | Cre-Chr10:8059872 | 4.50E-16 | dispersed | |
Cre10g0804 | Cre-Chr10:8059872 | Cre02g2023 | Cre-Chr2:33718261 | 1.60E-07 | dispersed | |
Cre07g1880 | Cre-Chr7:34222132 | Cre10g0804 | Cre-Chr10:8059872 | 2.80E-25 | transposed | |
Cre11g0574 | Cre-Chr11:2862151 | Cre10g0804 | Cre-Chr10:8059872 | 6.30E-28 | transposed | |
Cre10g0804 | Cre-Chr10:8059872 | Cre03g0818 | Cre-Chr3:6937125 | 4.00E-35 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g0804 | - | - | - | 0.0 |