Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0828 ATGGACTCTTTCTCTCCAGCATTGCTGGCCTTTAACTTTCTCCTTTATCTCTTCACCTATGTAGCTGCCACTGATTCCTTAACTGTTCAAAACCCATTTCTTAGAGATGGCTTTAGTCTGGTCTCCAAAAATGGAAATTTCGAATTGGGTTTCTTCAGTCCTGGTCTTTCGAGAGACCGTTACTTGGGAATTTGGTTCAAGAATCGGCGAGGTCCGACCTCTGTTTGGGTTGCGAATAGGAAAACGCCAATTAATGACTCATCTGGTGTACTGATGATGAACCTTACACCAGGAAATCTTACACTCTATAGCCATAATTCCACCGCCGCCATTGTTTGGTCCGCCAGGTTGCTGAGAAAAGTCCCCAATGGGGTACTCCAATTATTGGACACTGGAAATCTTGTGCTGAGAGATAGGGAAGATGAAAATCCCCAAAACTACTCGTGGCAAAGTTTTGATTACCCTACTGACACTCTTTTGCCTGGAATGAAGCTGGGTTGGGACTTGAGAAATAACATAAATAGAAGATTAGATGCTTGGAAAAATCCCAATGACCCATCTCCTGGAAACCTCAGTTGGAGGATGGAGCTTCATGAATATCCTGAGTCTGTCATGTGGAAAGGTTCCCAAGAATACTTCAGGCATGGCCCATGGAATGGTGTGAGAGTCACTAGTAGACCACTGGGTATTGCACCAATTCTGAACTTTAACTTTGTTTCAAATGAAGATGAAGTTTACTACCAATACTCTGTTGTTAATAAGTCTCATACAGTGATGGTGGTGATGAACCAATCCAATTACCTGCGCATAATGTACTTATGGTCTGCAGCTGAGAGACAGTGGAGACTTTACACTTCATTGCCAAGAGATTTCTGTGACAATTATGCCCTGTGTGGCCCTTATGGGTATTGTGATATAAGGGTAACTCCATCTTGTAAATGTCTAGAAGGGTTTAAGCCAAGATCACCTGATAGTTGGACGGCAGGGGAATTTGCGGATGGTTGTGAACGAAACAAACTGATGAACTGTGGTGATGAAGTTGGGTTTGCACAGCTCAACCAGCTGAAATTGCCAGACACAAAGCATACTTGGGTAAACAAAAGCATGAATCTTGAAGAGTGCAGGCAAAAATGCTTGAGAAATTGCTCTTGTATGGCTTATGCAAATACAAATATCAGTGGGAGTGGCAGTGGCTGTGCCTTGTGGATTGGTGATCTAATTGACTTGAAATTGATCCCGGACGCAGGACAAGATTTATATGTCAAAATGCTTGTATCAGAATTAGTCAAGCGTAGGGAGGCACACAAAACTGAAAGATTGAATCCTAAGGTGAAGATATCTTTGGTTGTGATTGTTGCCAGTTTCAGTTTGGCTATCCTCTTCATATGCTTATACATTTTCAAAAAGAGATCAACCGTCAAAGATGACCATGAGAAAATAGAAGCTCAAGATCTGGAGCTTCCCTTATTTGATCTATCCTTGATAAATAGTGCCACAAATAACTTCTCGATTGATAATAAGTTAGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATGTTGCAGTGAAGAGACTTTCACGGAGTTCTGGACAGGGAATGAACGAGTTTAAGAATGAAGTAATCCTGATTGCAAAACTTCAACATCGAAATCTTGTAAAGCTTCTTGGTTGCTGCATTCAAGGAGAAGAGAAAATGTTAGTTTATGAGTACATGCCAAACAAAAGTTTGGACTTCTTTATATTTGATCGAACACAACGTCAATTATTAGACTGGTCACAACGATACCACATTATTTGTGGAATTGCTAGAGGACTCATGTATCTTCATCAAGATTCTCGATTGAGGATTATACATAGAGATTTAAAAGCTAGTAATGTGTTACTTGATATGGATATGAATCCGAAAATCTCTGATTTTGGTTTGGCTAAAACTTGCGGTGGAGATCAAACTGAAGGACGAACGATAAAAGTGGTCGGAACTTACGGATATATGGCACCTGAATATGCTTTTGATGGACGATTCTCAGTAAAATCTGATGCTTTTAGTTATGGCATTTTGTTGTTGGAGATCATTAGTGGAAAAAGAAGCAGAAGTTTCTGCCACTTGAATGACCAAAATCTCATTGCATATGCCTGGCGATTGTGGAAAGAAGGAAATCCAGAGGAATTGATTGACGACGCCATTCGAGAAACATGCATCATTTCGGAGGTATTGAGATGTATCAATATCAGTTTGTTGTGTGTCCAACAACATCCTAACGATCGACCCACAATGTCATTGGTGGTTATGATGTTAGGCTGTGAACTTCCTTTGTCGCAACCAAAACAACCCGGATTTTTCGTAGAAAATGAAGCCATTGCAATGAAGAGTGGCTCAAGTAAAGACAAATCAACTTCAACTAATGAATTAACTATTACACTCCCAGATCCAAGGTAA 2457 40.5 MDSFSPALLAFNFLLYLFTYVAATDSLTVQNPFLRDGFSLVSKNGNFELGFFSPGLSRDRYLGIWFKNRRGPTSVWVANRKTPINDSSGVLMMNLTPGNLTLYSHNSTAAIVWSARLLRKVPNGVLQLLDTGNLVLRDREDENPQNYSWQSFDYPTDTLLPGMKLGWDLRNNINRRLDAWKNPNDPSPGNLSWRMELHEYPESVMWKGSQEYFRHGPWNGVRVTSRPLGIAPILNFNFVSNEDEVYYQYSVVNKSHTVMVVMNQSNYLRIMYLWSAAERQWRLYTSLPRDFCDNYALCGPYGYCDIRVTPSCKCLEGFKPRSPDSWTAGEFADGCERNKLMNCGDEVGFAQLNQLKLPDTKHTWVNKSMNLEECRQKCLRNCSCMAYANTNISGSGSGCALWIGDLIDLKLIPDAGQDLYVKMLVSELVKRREAHKTERLNPKVKISLVVIVASFSLAILFICLYIFKKRSTVKDDHEKIEAQDLELPLFDLSLINSATNNFSIDNKLGEGGFGPVYKGKLTNGQDVAVKRLSRSSGQGMNEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLVYEYMPNKSLDFFIFDRTQRQLLDWSQRYHIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTEGRTIKVVGTYGYMAPEYAFDGRFSVKSDAFSYGILLLEIISGKRSRSFCHLNDQNLIAYAWRLWKEGNPEELIDDAIRETCIISEVLRCINISLLCVQQHPNDRPTMSLVVMMLGCELPLSQPKQPGFFVENEAIAMKSGSSKDKSTSTNELTITLPDPR 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8941168 8944573 - CrPI670011_10g008280.1 Cre10g0828 510130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0828 818 Pfam PAN-like domain 344 409 IPR003609 -
Cre10g0828 818 Pfam D-mannose binding lectin 73 181 IPR001480 -
Cre10g0828 818 Gene3D Transferase(Phosphotransferase) domain 1 578 778 - -
Cre10g0828 818 CDD PAN_AP_plant 341 422 - -
Cre10g0828 818 PIRSF SRK 1 818 IPR024171 GO:0004674(InterPro)
Cre10g0828 818 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Cre10g0828 818 Gene3D - 19 152 IPR036426 -
Cre10g0828 818 Gene3D Phosphorylase Kinase; domain 1 465 577 - -
Cre10g0828 818 MobiDBLite consensus disorder prediction 797 818 - -
Cre10g0828 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Cre10g0828 818 SMART ntp_6 344 423 IPR003609 -
Cre10g0828 818 CDD STKc_IRAK 508 772 - -
Cre10g0828 818 ProSiteProfiles Protein kinase domain profile. 502 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0828 818 SMART blect_4 31 155 IPR001480 -
Cre10g0828 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g0828 818 Pfam Protein tyrosine and serine/threonine kinase 503 770 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g0828 818 SMART serkin_6 502 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0828 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 780 - -
Cre10g0828 818 SUPERFAMILY Protein kinase-like (PK-like) 486 772 IPR011009 -
Cre10g0828 818 CDD B_lectin 34 155 IPR001480 -
Cre10g0828 818 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Cre10g0828 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 786 - -
Cre10g0828 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 186 IPR036426 -
Cre10g0828 818 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0973 Cre-Chr7:11506013 Cre10g0828 Cre-Chr10:8941168 1.80E-80 dispersed
Cre09g0247 Cre-Chr9:2571365 Cre10g0828 Cre-Chr10:8941168 2.00E-115 dispersed
Cre10g0828 Cre-Chr10:8941168 Cre11g0842 Cre-Chr11:5592150 6.00E-85 dispersed
Cre10g0828 Cre-Chr10:8941168 Cre10g0829 Cre-Chr10:8956144 0.00E+00 tandem
Cre05g1675 Cre-Chr5:27974467 Cre10g0828 Cre-Chr10:8941168 2.30E-270 transposed
Cre10g0828 Cre-Chr10:8941168 Cre03g0820 Cre-Chr3:6960579 2.50E-184 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64454 PF07714 PK_Tyr_Ser-Thr 4.90E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0828 - - - 0.0