Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0829 ATGGACTCTTTCTTCTCAACACTCGTTGCCTTTAACTTAGTCTTTCTTCTCTTCAGGTCTCTTGCTGTCTCCGATTCCTTAACGGCTCAAAACCCGTATCTCAGAGATGGCCTTACTCTGGTCTCTAGAAATGGAATCTTCGAATTGGGTTTCTTCAGTCCTGGACTTCCCGCCAACCGTTACTTGGGAATCTGGTTCAAGAATCGGCGAGGTCCGACCTCTGTTTGGGTTGCGAACAGGAAAACCCCCATTAATGATTCGTCTGGTGTACTGGTGATGAACATTACAACAGGAAATCTTACACTCTACAGCCATAATTCCACTGCCATTGTTTGGTCTGCCAGGTTACTGAGAAAAGTCCCCAACGGGGTACTCCAACTATTGGACACTGGAAATCTTGTGCTGAGGAATAGGGAAGATGAAGATCCGCGAAACTATTCCTGGCAAAGCTTTGATTACCCTACTGACACTCTCTTGCCTGGAATGAAGCTAGGTTGGGACTTGAGAAATAACATAGAAAGAAGATTAGAGGCTTGGAAGAATCTCAATGATCCATCTCCTGGAGACCTCAGTTGGAGGATGGAGCTTCATGAATATCCTGAGACTGTCATGTGGAATGGTTCCAAAAAGTACGTCAGGCATGGCCCATGGAATGGTGTGAGACTCAGTAGTAGACCACTAGCTGCAGCGCCAATTTTGAACTTCAACTTTGTTTCAAATGAGGATGAGGTTTACTACCAATACTCTGTTGTAAATAAGTCTCATTCAGTGATGTTGGTGATGAACCAATCCAATTATGTGCGCATATTGTACTTGTGGTCTGCAGCTGAAAGACGATGGAGAGTTTACACTTCATTACCAAGAGATAACTGTGACAATTATGCCCTGTGTGGCCCCTATGGATATTGTGATATAAGAGTCACCCCATCTTGTTTATGTCTAGAAGGGTTCAAGCCAAGATCACCTGATAGTTGGGAGGCCGGGGAATTTGCAGACGGTTGTGAACGAAACAAACTGATGAACTGTGGTGATGAAGTTGGGTTTGCACAGCTCAACCAGTTGAAATTGCCAGACACTAAGTATACTTGGGTCAACAAAAGCATGAATCTTGAGGAGTGCAAGCAAAAATGCTTGAGAAATTGTTCGTGTATGGCTTATGCAATGACAAATGTCAGTGGCAGTGGCAGTGGCTGTGCCTTGTGGATTGGTGATCTAATTGACTTGAAACTGATCCCGGACGCAGGACAGGATTTATATGTCAAAATGCTGGCATCAGAATTAGTCAAGCATGGGGAGGCACACAAAACTGAAAGATTGAATCCTAAGGTGAAGATTGCTTTGTTTGTGATTTCCGGTTTAGGTTTGGCTATCCTCTTCATAGGCATAGGCGTATACATTTTCAAGAAGCGATCAACCTTCAAAGATGAACAAGAGAAAATAGAAGCTCAAGACCTGGAGCTTCCCTTGTTTGATCTATCCTTGATTAATAGTGCCACAGATAACTTCTCACATAATAATAAGCTAGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGATGTTGCAGTGAAGAGACTTTCACAGAGTTCTGGACAAGGAACGAATGAGTTTAAGAATGAAGTGATCCTGATCGCAAAACTGCAACATCGAAACCTTGTAAAGCTTCTTGGTTGCTGCATTCAAGGAGATGAGAAAATGCTAGTTTATGAGTATATGCCAAACAAAAGTTTGGACTTCTTTATATTTGATCAAACACAACGTCAATTATTAAATTGGTCAAAACGGTACCGAATTATTTGTGGAGTTGCTAGAGGACTCATGTATCTTCATCAAGATTCTAGATTGAGGATTATACATAGAGATTTAAAAGCAAGTAATGTTTTACTAGATATGGATATGAATCCAAAAATCTCTGATTTTGGACTGGCTAAAACTTGTGGTGGGGATCAAACTGGAGGAAGAACATTAAGAGTGGTCGGAACTTACGGATATATGGCACCAGAGTATGCTTTTGATGGACAATTCTCAGTGAAATCTGATGCTTTTAGTTATGGCATCTTGCTGCTGGAGATCATTAGTGGGAAAAGAAGCAGAACTTTCTGCCATTTGAATGACCAAAATCTAATAGCATATGCATGGCGATTGTGGAAAGAAGGAAATATAGAAGAATTGATCGACGATGCCATTCGAGAAACATGCAGCCTTTCGGAGGTACTGAGATGTATCAATATCAGTTTGTTGTGTGTTCAACAACATCCAAATGATCGACCCACAATGTCATTGGTGGTTATGATGTTAGGCTGTGAAATTCCTTTGTCGCAACCGAAACAACCCGGATTTTTCATAGAAAATGAAAAAGCCATTGCAATGAAAAGAGGCTCAAGTAAAGATAAATCAACTTCAACTAATGAATTGACTATTACGCTCCCAGATCCGAGGTAA 2460 41.42 MDSFFSTLVAFNLVFLLFRSLAVSDSLTAQNPYLRDGLTLVSRNGIFELGFFSPGLPANRYLGIWFKNRRGPTSVWVANRKTPINDSSGVLVMNITTGNLTLYSHNSTAIVWSARLLRKVPNGVLQLLDTGNLVLRNREDEDPRNYSWQSFDYPTDTLLPGMKLGWDLRNNIERRLEAWKNLNDPSPGDLSWRMELHEYPETVMWNGSKKYVRHGPWNGVRLSSRPLAAAPILNFNFVSNEDEVYYQYSVVNKSHSVMLVMNQSNYVRILYLWSAAERRWRVYTSLPRDNCDNYALCGPYGYCDIRVTPSCLCLEGFKPRSPDSWEAGEFADGCERNKLMNCGDEVGFAQLNQLKLPDTKYTWVNKSMNLEECKQKCLRNCSCMAYAMTNVSGSGSGCALWIGDLIDLKLIPDAGQDLYVKMLASELVKHGEAHKTERLNPKVKIALFVISGLGLAILFIGIGVYIFKKRSTFKDEQEKIEAQDLELPLFDLSLINSATDNFSHNNKLGEGGFGPVYKGKLTNGQDVAVKRLSQSSGQGTNEFKNEVILIAKLQHRNLVKLLGCCIQGDEKMLVYEYMPNKSLDFFIFDQTQRQLLNWSKRYRIICGVARGLMYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTGGRTLRVVGTYGYMAPEYAFDGQFSVKSDAFSYGILLLEIISGKRSRTFCHLNDQNLIAYAWRLWKEGNIEELIDDAIRETCSLSEVLRCINISLLCVQQHPNDRPTMSLVVMMLGCEIPLSQPKQPGFFIENEKAIAMKRGSSKDKSTSTNELTITLPDPR 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8956144 8959509 - CrPI670011_10g008290.1 Cre10g0829 510131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0829 819 Pfam Protein tyrosine and serine/threonine kinase 505 770 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g0829 819 SUPERFAMILY Protein kinase-like (PK-like) 487 772 IPR011009 -
Cre10g0829 819 CDD B_lectin 33 154 IPR001480 -
Cre10g0829 819 Gene3D Hepatocyte Growth Factor 339 418 - -
Cre10g0829 819 PIRSF SRK 1 819 IPR024171 GO:0004674(InterPro)
Cre10g0829 819 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544(InterPro)
Cre10g0829 819 Pfam PAN-like domain 343 408 IPR003609 -
Cre10g0829 819 SMART blect_4 31 154 IPR001480 -
Cre10g0829 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 780 - -
Cre10g0829 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Cre10g0829 819 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Cre10g0829 819 Gene3D - 20 151 IPR036426 -
Cre10g0829 819 SMART ntp_6 343 422 IPR003609 -
Cre10g0829 819 MobiDBLite consensus disorder prediction 798 819 - -
Cre10g0829 819 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Cre10g0829 819 CDD STKc_IRAK 508 772 - -
Cre10g0829 819 Pfam D-mannose binding lectin 73 180 IPR001480 -
Cre10g0829 819 MobiDBLite consensus disorder prediction 800 819 - -
Cre10g0829 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g0829 819 CDD PAN_AP_plant 340 421 - -
Cre10g0829 819 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Cre10g0829 819 SMART serkin_6 502 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0829 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 786 - -
Cre10g0829 819 ProSiteProfiles Protein kinase domain profile. 502 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g0829 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Cre10g0829 819 Gene3D Phosphorylase Kinase; domain 1 464 577 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1675 Cre-Chr5:27974467 Cre10g0829 Cre-Chr10:8956144 1.10E-272 dispersed
Cre10g0829 Cre-Chr10:8956144 Cre11g0842 Cre-Chr11:5592150 2.20E-87 dispersed
Cre10g0828 Cre-Chr10:8941168 Cre10g0829 Cre-Chr10:8956144 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64455 PF07714 PK_Tyr_Ser-Thr 1.90E-49 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0829 - - - 0.0