Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g0841 | ATGGCCGCCACCGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATTCACGGGAGGTGGGCCATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA | 801 | 55.56 | MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS | 266 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9175870 | 9177561 | + | CrPI670011_10g008410.1 | Cre10g0841 | 510143 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g0841 | 266 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 55 | 259 | - | - | |
Cre10g0841 | 266 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 27 | 265 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Cre10g0841 | 266 | SUPERFAMILY | Chlorophyll a-b binding protein | 47 | 263 | - | - | |
Cre10g0841 | 266 | Gene3D | Chlorophyll a/b binding protein domain | 55 | 259 | - | - | |
Cre10g0841 | 266 | Pfam | Chlorophyll A-B binding protein | 65 | 233 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre10g0841 | Cre-Chr10:9175870 | Cre10g1333 | Cre-Chr10:26855449 | 7.20E-96 | dispersed | |
Cre10g0841 | Cre-Chr10:9175870 | Cre04g2048 | Cre-Chr4:37721756 | 1.10E-96 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g0841 | K08914 | - | csv:101207278 | 521.161 |