Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0841 ATGGCCGCCACCGCCACCGCCACCTCCGCCACCCTCCTCCGGGCTACTCCCTTTCTTGGCCAGACCAGAGGCTCTTCCCAGAACTCCCTCAGAGATGTCGTCGCCATGGGAACTGGCAAATACACCATGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCCTACTTGAACGGTGAATTCCCCGGCGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCTTTCGCCAAGAACAGAGCTCTCGAGGTGATTCACGGGAGGTGGGCCATGTTGGGAGCATTGGGTTGCATAACACCCGAAGTGCTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTGTGGTTCAAGGCAGGGGCCCAAATCTTCACAGAAGGTGGTCTAGACTACCTAGGCAACCCCAACCTGGTCCACGCCCAGAGCATCCTAGCCGTCTTGGGGTTCCAAGTGGTCCTAATGGGTCTTGTCGAAGGCTTCCGCATCAACGGCCTCGACGGTGTCGGCGAGGGCAACGACCTCTACCCGGGCGGTCAGTACTTTGACCCTCTCGGACTGGCCGATGACCCAGTCACCTTCGCGGAGCTGAAGGTCAAGGAGATCAAGAATGGCCGTCTTGCCATGTTTTCCATGTTTGGCTTCTTTGTTCAGGCCATTGTCACTGGAAAGGGCCCTCTTGAGAACCTTCTTGACCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTTTATGCTACCAAGTTTGCCCCTGGCTCATAA 801 55.56 MAATATATSATLLRATPFLGQTRGSSQNSLRDVVAMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9175870 9177561 + CrPI670011_10g008410.1 Cre10g0841 510143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0841 266 FunFam Chlorophyll a-b binding protein, chloroplastic 55 259 - -
Cre10g0841 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 27 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cre10g0841 266 SUPERFAMILY Chlorophyll a-b binding protein 47 263 - -
Cre10g0841 266 Gene3D Chlorophyll a/b binding protein domain 55 259 - -
Cre10g0841 266 Pfam Chlorophyll A-B binding protein 65 233 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g0841 Cre-Chr10:9175870 Cre10g1333 Cre-Chr10:26855449 7.20E-96 dispersed
Cre10g0841 Cre-Chr10:9175870 Cre04g2048 Cre-Chr4:37721756 1.10E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0841 K08914 - csv:101207278 521.161