Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0922 ATGGGAGCCCATCCAGCATTGTTGGCCCAAGCAGGCATCTCTGACTCTAACTCATTGATATCGCCCTCTCATTTTTCTTCGCCTCTGCTGCAACTTGCTAAGGACCTCTACTTCTCCATCGGATCTCTGAGCTTCGACAGGATAATTTTGGCAATTCTTCGGAGTAAAGAACTCGTAACTGAAATGGCTGGGGGAGGAATGATCCGGCAGTTGCTGAGGAAATTTCCATCTCAATCTTCAACCCCTCCATTGACCTCATCCCTTATTTCAAAGAATCAGGAAGCTGGCTTTGCTGGGATGAACTCCTTTAGAAGGCTGGCTCTTCTTGGAGCAGGCATTTCAGGGTTTTTCAGTTTTGCAACTTTGGCATCTGCTGATGAGGCAGAACATGGTTTGGAGTGTCCAAACTACCCGTGGCCTCACCAGGGCATTTTGAGTTCATACGATCATGCTTCGATTCGTCGTGGTCATCAGGTTTACCAACAAGTTTGTGCATCTTGTCATTCCATGTCTTTAATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAGACAAAAGCTATGGCTGCTGAAATTGAGGTAGTTGATGGACCCAATGATGAGGGTGAGATGTTCACTCGTCCAGGTAAACTCAGTGACCGGTTTCCTCAACCATATGCAAATGAACAAGCTGCTAGATTTGCTAATGGTGGAGCATACCCTCCAGATCTGAGCCTTATCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGTGTTTCGATCCGAGAGGGTCTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTTGAGTACGAAGATGGTACCCCTGCCACAGAAGCACAGATGGGGAAAGATGTTGTATCGTTCTTGTCATGGGCTGCTGAACCAGAAATGGAAGAAAGGAAACTGATGGGATTCAAATGGATCTTTGTGCTCTCTCTGGCTCTACTTCAGGCTGCATATTACCGGCGATTGAAGTGGTCGGTTTTGAAGTCCCGCAAGCTGGTTCTTGATGTTCAGCGAAAAGATGGAATAGGAAGACGTGTTTCCAAAACGAACAAGATACGGGTTGAGAAGGGGAAGTTAGCAAAGTTAGACAAGATTGGAATGGGCATAGGAACATGTATCCGATGTACCAGATCTGCTAATGCTCCCAGCTTGGTGCAAAAGGCTTCTCGCAAGTCCTTTTTCAAGCCCATCTCGAATACGATGCGGTATGGTACTCGTGACCCTGTTGGTGGCTATTACTGCTTCACACTTAAATGCCCCCAGCTCTGTCTTCCTACTTAA 1371 46.32 MGAHPALLAQAGISDSNSLISPSHFSSPLLQLAKDLYFSIGSLSFDRIILAILRSKELVTEMAGGGMIRQLLRKFPSQSSTPPLTSSLISKNQEAGFAGMNSFRRLALLGAGISGFFSFATLASADEAEHGLECPNYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVQRKDGIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTCIRCTRSANAPSLVQKASRKSFFKPISNTMRYGTRDPVGGYYCFTLKCPQLCLPT 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11202230 11210083 - CrPI670011_10g009220.1 Cre10g0922 510224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0922 456 SUPERFAMILY Cytochrome c 132 322 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 Pfam Cytochrome C1 family 139 355 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 323 366 IPR021157 -
Cre10g0922 456 FunFam Cytochrome c1, heme protein, mitochondrial 324 368 - -
Cre10g0922 456 Gene3D - 324 369 - -
Cre10g0922 456 PRINTS Cytochrome C1 signature 323 338 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 PRINTS Cytochrome C1 signature 273 284 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 PRINTS Cytochrome C1 signature 137 156 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 PRINTS Cytochrome C1 signature 235 259 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 PRINTS Cytochrome C1 signature 304 323 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 PRINTS Cytochrome C1 signature 157 176 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 PRINTS Cytochrome C1 signature 202 222 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 PRINTS Cytochrome C1 signature 284 303 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 Gene3D - 128 323 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 PANTHER CYTOCHROME C1 87 366 IPR002326 GO:0005750(PANTHER)|GO:0006122(PANTHER)|GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 ProSiteProfiles Cytochrome c family profile. 151 258 IPR009056 GO:0009055(InterPro)|GO:0020037(InterPro)
Cre10g0922 456 FunFam Cytochrome c1, heme protein 128 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0922 K00413 - csv:101215010 603.979