Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0936 ATGGAACTACCTTCACCATTTGTTTTCTTACTCCACCACCTTCCTCATCGTCATCATCGATTACCCAATTTCAGATCAATAGCAGCTGTCATTGTGCTGCATAGGAGTCTCATTGTTCAAGTTCCATCTTCCCAGCATTTATTTAGTCTTAGCAATGGTTCTTGTTGGTTCTTTGCAACTTTTACCTCTCAGAGCTATAACATACGACTACTGAATGTAGCCAGTCCATCGTCTCTTTTATTTCAGAAGAACACTTGGAGCCCTCATTTATTTAGCATGAAATACCCACCTAATTACATTGTGCCTTCTAGATGCAATGTACTCAGGTGCCAGTCATCATTGATGACAAACCAACCACTGGATCCCCCTGGGATGAAGGCTGCTATAGTGGCATTGACAAGGTTTTGTAATGTATTAGGTGCTTGTCCTCCTCCAGTGGTTAATTTGGTTCCTGCAGTTTGTATTATCATGTTTGCTGTATGGGGTCTTGGACCATTTTTGCGTTATACGAGAAGCCTATTCCATAATGATAGTAACTGGAAGAAAAGTCGGACATATAACATCATGACCTTGTATCTTCAACCATTACTGCTGTGGACTGGAGCAACACTTATTTGCAGAGCTTTAGATCCAGTAGTTTTACCTACAGAGTCCAGCCAAGTTGTGAAGCAACGAGTGTTGAATTTTGTTAGGTCGTTGTCCACTGTGCTGGCCTTTGCATATTGCTTATCTAGCATGATTCAACAAGCACAGAAATTCTTCTCAGAGAGTACTGATTCCAGTGACGCGAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTATACTCTGCCGTATGGGTTGCCGCTCTCTCATTGTTCATGGAGCTGTTGGGCTTTTCAACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACGGTATTGCTGACATTAGCTGGCCGTGAGATTTTCACCAACTTCCTCTCAAGTGTGATGATTCATGCAACTCGTCCTTTTGTTGTTAATGAGTGGATCCAAACGAAGATTGAGGGCTACGAAGTTTCTGGCACTGTTGAGCACGTAGGGTGGTGGTCGCCAACAATCATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATAAGTTTACCATGAATGTCGTTAGAAATCTCAGTCAAAAAACTCACTGGCGGATTAAAACCCACCTTGCCATTAGCCATTTGGACGTCAACAAAATCAATAACATTGTTGCAGACATGCGGAAAGTCCTGGCGAAGAACCCTCAAGTTGAACAACAGAGATTGCATAGAAGAGTATTTTTGGAAAACGTGGATCCTGAAAATCAGGCACTTTTGATTTTGATATCGTGTTTTGTTAAGACTTCACATTTTGAAGAATACCTTTGTGTAAAGGAAGCTATAATTTTGGATCTTCTTAGAGTCATTAGACATCACCGGGCTCGACTTGCAACACCAATCCGCACAATGCAGAAGATGCATAGTGATTCAGACATGGAAAGCGTTCCATTTTCTGATTCAATATTTGGCCACCGTGGTGCGACTTTGAATCGCCGCATGCTGATGATTGAGCCCCCTTACAAAGTTTATGGAGAAGATAGAAAGCAAAGCCATAGCAGGACATCACGCACAACGGGAGAACAAAATGGTAAGCCCGTTGCACGGTCGTCGGGTGACAGCAAGGCTGCCAAAGAGACAATGCCATCTGATAGAAAGACAGAAGTCAAGACTGGAGGAGATGCTGATACAAAAATGCATCCCAAAGTTTCGATGTCAACCTCTGAAGATAGATCAAGCAATGAATTGAAACATAAACCATCATCAAGGTCTGCTGCAAGTACCAGTACCTCTGATATGCCAGATGCCAAAACAACTAAATTAGATGCTGATAATTCAATGGAAGATTCTAGTCCCAAGCAATCCGAAAATAGCTTGGGAAGTAACAAGCAGAACTTCAAGCCTTCCCTTCCTGTTGTTTCCTTTCCGGAAGATGTTAAGAAACCAGGAGGAACTACTTCAGCAGCAGCTTCACAGCCAAGGATAGAAGGTGAGCAGACAACAGTTTCAAATCCATCGATAACAAAGCCTGGCGTGGAAGAGAATATAATCCTTGGTGTTGCTTTGGATGGCTCTAAGAGAACACTTCCTATTGAGGATGAAGTACCTACCGCATCGGGAGCAAAAGATTTGGCTGCATGCAGGAATGGGAACAGTGCGAATGGAGCAACAACGGCAGATAAGAACATGAAACGTCAGTCTCCTTCTTCCCCTACCACATCTTCTAGTGAATAG 2292 42.98 MELPSPFVFLLHHLPHRHHRLPNFRSIAAVIVLHRSLIVQVPSSQHLFSLSNGSCWFFATFTSQSYNIRLLNVASPSSLLFQKNTWSPHLFSMKYPPNYIVPSRCNVLRCQSSLMTNQPLDPPGMKAAIVALTRFCNVLGACPPPVVNLVPAVCIIMFAVWGLGPFLRYTRSLFHNDSNWKKSRTYNIMTLYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAYCLSSMIQQAQKFFSESTDSSDARNMGFQFAWKAVYSAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVDPENQALLILISCFVKTSHFEEYLCVKEAIILDLLRVIRHHRARLATPIRTMQKMHSDSDMESVPFSDSIFGHRGATLNRRMLMIEPPYKVYGEDRKQSHSRTSRTTGEQNGKPVARSSGDSKAAKETMPSDRKTEVKTGGDADTKMHPKVSMSTSEDRSSNELKHKPSSRSAASTSTSDMPDAKTTKLDADNSMEDSSPKQSENSLGSNKQNFKPSLPVVSFPEDVKKPGGTTSAAASQPRIEGEQTTVSNPSITKPGVEENIILGVALDGSKRTLPIEDEVPTASGAKDLAACRNGNSANGATTADKNMKRQSPSSPTTSSSE 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12310075 12318164 + CrPI670011_10g009360.1 Cre10g0936 510238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0936 763 MobiDBLite consensus disorder prediction 736 763 - -
Cre10g0936 763 MobiDBLite consensus disorder prediction 564 583 - -
Cre10g0936 763 Gene3D - 332 387 IPR023408 -
Cre10g0936 763 MobiDBLite consensus disorder prediction 636 655 - -
Cre10g0936 763 MobiDBLite consensus disorder prediction 605 622 - -
Cre10g0936 763 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 62 740 IPR045042 -
Cre10g0936 763 Pfam Mechanosensitive ion channel, beta-domain 316 386 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Cre10g0936 763 SUPERFAMILY Sm-like ribonucleoproteins 316 386 IPR010920 -
Cre10g0936 763 MobiDBLite consensus disorder prediction 726 763 - -
Cre10g0936 763 Gene3D - 226 330 - -
Cre10g0936 763 MobiDBLite consensus disorder prediction 528 695 - -
Cre10g0936 763 MobiDBLite consensus disorder prediction 671 695 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1108 Cre-Chr8:24243536 Cre10g0936 Cre-Chr10:12310075 1.10E-188 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0936 K22047 - csv:101217250 1224.92