Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0943 ATGGCGACCAACAAGGAGAAAGAACCAGTTTGTGTGACCGGAGCCAATGGATTCATCGGATCCTGGGTCGTCCGTACGCTTTTGGAATCTGGCTACACAACAATACATACCTCCATCTTCCCCGGCTCCGATTCTTCCCATTTGTTCAATCTCCAGGCCTCCACTAACCCTAATGCTAACCTTAGGGTTTTCGAAGCGAATGTGATGGACGGCGAGGCGGTGGCCAGGGCTGTCGAAGGCTGCAAGGGCGTATTCCACATTGCCTCACCCTGCACATTGGAGGATCCGATTGATCCGCAGAAAGAATTGGTGGAGCCGGCGGTGCAAGGCACTGTCAATGTTCTTAATGCGGCCAAGAAGTTCGGAGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCTGCTCTTGTCCCTAACCCCGGTTGGCCGTCTGGTATGCCTTTCGATGAATCCTCATGGACGGACATAGAGTACTGCAAATCGCGCAAGAAATGGTATCCAGTTTCAAAAACATTGGCAGAGAAATCAGCATGGGAGTTTGTAGAGAATCATGGACTGGATGTTGTTTCCATCCTGCCAGCCACATGTCTTGGTCCTCTTCTCCAACCTAATTTGAACGCAAGTTGTGCTGTATTGCTGCAGTTGCTCCAGGGATCCCAGGATAGTCAGGAATATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAATTTTATTGTTTGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTTCCGATTTTGCGGACAAAGTCTCAAAAATATGCCCTCAATTTCCAGTTCACAGATTTGTGGGAGAAACACAACCCGGGTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTTGTTTTCACCCCTCTTGAAGTTGCCATTCAAGATACCCTTGAGAGTCTTAGAAGCAAAGGCTTTTTGGATCAGTGA 984 47.66 MATNKEKEPVCVTGANGFIGSWVVRTLLESGYTTIHTSIFPGSDSSHLFNLQASTNPNANLRVFEANVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVQGTVNVLNAAKKFGVRRVVLTSSISALVPNPGWPSGMPFDESSWTDIEYCKSRKKWYPVSKTLAEKSAWEFVENHGLDVVSILPATCLGPLLQPNLNASCAVLLQLLQGSQDSQEYHWLGAVHVKDIAKAQILLFESPTASGRYLCTNGIYQFSDFADKVSKICPQFPVHRFVGETQPGLVACKDAAKRLIDLGLVFTPLEVAIQDTLESLRSKGFLDQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12599316 12602634 - CrPI670011_10g009430.1 Cre10g0943 510245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0943 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 320 IPR036291 -
Cre10g0943 327 FunFam Cinnamoyl-CoA reductase 1 3 327 - -
Cre10g0943 327 Gene3D - 1 327 - -
Cre10g0943 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 317 IPR050425 GO:0016616(PANTHER)
Cre10g0943 327 CDD FR_SDR_e 10 303 - -
Cre10g0943 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0353 Cre-Chr3:1935417 Cre10g0943 Cre-Chr10:12599316 2.90E-91 dispersed
Cre10g0943 Cre-Chr10:12599316 Cre10g1448 Cre-Chr10:28289633 2.00E-63 dispersed
Cre10g0943 Cre-Chr10:12599316 Cre09g0311 Cre-Chr9:3032537 6.80E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0943 - - - 0.0