Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0989 ATGGCTGCCAATTTCGCCATGCTTAAACCTTGTTCGGCATTTTCGACTTCATCATTCGTTCAGAGGAAATTTCGTGCGCATAAATCACTATGCACTGCCCCATGTTCCTCTTTTTATCCACAATGTCAAGGAGGAGCTTATGGTTTATGTGCCGTTAAATGTGCTTCTTCAAATGGGAAGGGGCCTGATTCCCTGGATAATGGAGTTAAAAAAGTGGAGAGGTTACTTGAAGAGAAACGGCGGGCTGAATTGTCTGCTCGGATCGCTTCTGGCGAATTTACAGTCGAAAAAACTGGTTTTCCATCTATATTGAGGAGTGGGTTGTCAAAGTTGGGTGTTCCCAGTGAGATTCTGGATTTACTATTTGGTTTCGTCAATGCTCAAGAAGAATATCCCAAGATTCCAGAAGCTAAAGGATCAATAAGTGCAATTCGTAGTGAGGCCTTCTTCATACCTCTGTATGAGCTTTATCTCACGTATGGTGGAATATTTAGATTGACTTTTGGGCCAAAGTCGTTCTTGATAGTGTCTGATCCTTCCATTGCTAAACATATACTGAAGGATAATCCAAAGAACTATTCTAAGGGTATCTTAGCTGAAATTCTTGACTTTGTCATGGGGAAGGGGCTTATACCAGCTGATGGGGAGATATGGCGTGTACGAAGACGGGCTATAGTCCCTTCTTTGCATATGAAGTATGTAGGAGCTATGATTAATCTTTTTGGAGAAGCTGCAGATAGGCTTTGCAAGAAGCTAGATGCTGCAGCATCTGATGGAGTAGATGTGGAAATGGAGTCCCTATTCTCCCGTTTGACTTTAGATATCATTGGCAAGGCAGTTTTTAACTATGACTTTGATTCACTTACAAATGATGCTGGCATAGTTGAGGCTGTTTATACTGTGCTAAGAGAAGCAGAAGATCGCAGTGTTGCGCCAATTCCGGTATGGGAAATTCCAATTTGGAAGGATATTTCACCACGGCAAAAAAAGGTCTCCAAAGCCCTCAAATTGATCAATGGCACTCTTGATCAACTAATTGCTATATGCAAGAGGATGGTTGACGAGGAGGAACTGCAGTTTCATGAGGAATACATGAATGAGCAAGATCCTAGCATCCTTCATTTCCTTTTGGCATCAGGAGATGATGTTTCGAGCAAGCAGCTTCGTGATGACTTGATGACCATGCTTATAGCTGGGCATGAAACATCTGCTGCAGTCTTAACATGGACCTTTTATCTTCTTTCGAAGGAGCCTAGGGTCATGGCCAAGCTCCAAAAGGAGGTTGACTCAGTCCTTGGGGATCGTTTTCCAACAATTGAAGATATGAAGAACCTCAAATATGCCACACGAATAATTAATGAATCCTTGAGGCTTTACCCACAGCCCCCAGTTTTAATACGTCGATCTCTTGATAACGATATGCTCGGGAAGTACCCCATAAAGAAGGGTGAGGACATATTCATATCTGTTTGGAACTTGCATCGCAGTCCAGAACTTTGGGATGATGCAGATGAATTTAATCCTGAAAGGTGGCCCTTGGATGGACCCAATCCTAATGAGACAAATCAAAATTTCAGATATTTGCCTTTTGGTGGTGGACCACGGAAATGTGTGGGAGACATATTTGCTTCATATGAGACTGTTGTAGCACTTGCCATGCTTGTACGGCGATTTGACTTCCAAATAGCACTTGGAGCACCTCCAGTAAAAATGACAACAGGAGCTACAATTCACACAACAGATGGATTGCAAATGACAGTTACACGAAGAATGAAACCTCCAATCATACCCACTTTAGAGGTGCCTGAAATGGTCGTTGATTCATCTGTCAGTTTCTTGAAAGATGAAACACAAATTGTTCAAGAAGGAGAAGTTTCTTCTGCACATTCCTAA 1893 42.26 MAANFAMLKPCSAFSTSSFVQRKFRAHKSLCTAPCSSFYPQCQGGAYGLCAVKCASSNGKGPDSLDNGVKKVERLLEEKRRAELSARIASGEFTVEKTGFPSILRSGLSKLGVPSEILDLLFGFVNAQEEYPKIPEAKGSISAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILKDNPKNYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPSLHMKYVGAMINLFGEAADRLCKKLDAAASDGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDAGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRQKKVSKALKLINGTLDQLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVMAKLQKEVDSVLGDRFPTIEDMKNLKYATRIINESLRLYPQPPVLIRRSLDNDMLGKYPIKKGEDIFISVWNLHRSPELWDDADEFNPERWPLDGPNPNETNQNFRYLPFGGGPRKCVGDIFASYETVVALAMLVRRFDFQIALGAPPVKMTTGATIHTTDGLQMTVTRRMKPPIIPTLEVPEMVVDSSVSFLKDETQIVQEGEVSSAHS 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14799156 14806713 + CrPI670011_10g009890.1 Cre10g0989 510291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0989 630 CDD CYP97 151 583 - -
Cre10g0989 630 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 530 539 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre10g0989 630 SUPERFAMILY Cytochrome P450 145 590 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 Pfam Cytochrome P450 154 574 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 Gene3D Cytochrome P450 132 596 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PANTHER CYTOCHROME P450 FAMILY 4 145 570 IPR050196 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER)
Cre10g0989 630 PRINTS E-class P450 group I signature 537 560 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS E-class P450 group I signature 407 433 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS E-class P450 group I signature 449 467 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS E-class P450 group I signature 387 404 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS E-class P450 group I signature 527 537 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS E-class P450 group I signature 157 176 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS E-class P450 group I signature 489 513 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS P450 superfamily signature 537 548 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS P450 superfamily signature 528 537 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS P450 superfamily signature 398 415 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g0989 630 FunFam Carotene epsilon-monooxygenase, chloroplastic 135 592 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1460 Cre-Chr7:29703950 Cre10g0989 Cre-Chr10:14799156 3.80E-120 dispersed
Cre10g0989 Cre-Chr10:14799156 Cre05g2117 Cre-Chr5:33027292 8.30E-34 dispersed
Cre10g0989 Cre-Chr10:14799156 Cre04g1049 Cre-Chr4:29135078 7.30E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0989 K15747 - csv:101215492 1157.9