Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1060 ATGAAACGATTTGCTAACAAGCAATCAACCTTATTTGATCATCAGAATCAAATCAATGGCATTGAAAATCAGTTGCTGTTAAGATGTGGAGAGATTAAGCGTTGGGAATCCGATCAATGCACCAACTATTCTCAATTTTCCTTCAAACCAGTCGTCGGCAAATGCTTTGACTTTATTCTACTCAAATTCAGCTCGTCTTCAATCGAGCACCAGAACATGGCAGAAATAGATATTGAACGAATCCTTTTAGAAGCAAAACATCGATGGCTACGCCCGGCTGAAATATGTGAAATTCTCAAAAACTACGATAAATTTTCTATTGCTTCAGACCCTGCTAATATGCCTCCAAGTGGTTCACTTTTTCTTTATGATCGAAAGGTGGTAAGATACTTCCGCAAGGATGGACATAATTGGAGGAAGAAGAAAGGAAAGGCGGTAAAGGAAGCTCACGAGAGGCTCAAGGCTGGAAGTGTGTATGTGCTGAATTGCTACTATGCACATGGGGAAGAAAATGAAAATTTTCAGAGGCGCACTTATTGGATGCTGGAAGAGGATCTATCAAACATTGTTCTTGTCCACTATCGGGAAGTGCAGAGCAGTAGAGGAAATTTCAATCGTAATAGGGGGACTGATGAAGCTGCTCTATTCTCTCGAGAATTTGAAGATACTAAGAACCGTCCAGAAATGGGCGCTTCTAACTCCTCTAGTTTTCATCCATCTAATTATAAAATGCTTTCACAAACTGCTGAAATTAGCCTGAACAGTGCCCAGGTATCAGAATATGAAGATGCTGAATCAGAATACGGTAACCGAGAAAGTACTGTTTTCCATTCTTTTCTTGGATTACAACAGTTGAAAATGGAGAGTAATAGTGCTGATCTCTGTGATTCGAAGTATTCTATATCATTATCAGATATTTATCAAGAAGACTTTACAGCCTTTGGTGGGAATGGCTTTCCGACTACATCGGATAGAAGTAAATATAGCAATAGTGTTGGATTCATTTACGAGCCCCACAGAAAACTTTGTTTCTCTTCTGAAAACGTCTTGGAAAGTGGTACTACTGGAATATATTCATCCCATCTGCAGCCATCATTTTTTACATCTCAACCTCAAATTTTAGACGATGTTCCAAAACAAGGTGATGAAATAGTGGGACTGCTCTCCTCTGATAAATGTAAAAGGACAGTGTTTAATAATCATCTACATTCCCAGGAATATTGTCAGGAATTACTTGTGAAATCATCTTGCCAACGAGCCTCTGATCTACCCAGGTCCATAGACGCTAGCACTTCACATTTATAA 1305 39.16 MKRFANKQSTLFDHQNQINGIENQLLLRCGEIKRWESDQCTNYSQFSFKPVVGKCFDFILLKFSSSSIEHQNMAEIDIERILLEAKHRWLRPAEICEILKNYDKFSIASDPANMPPSGSLFLYDRKVVRYFRKDGHNWRKKKGKAVKEAHERLKAGSVYVLNCYYAHGEENENFQRRTYWMLEEDLSNIVLVHYREVQSSRGNFNRNRGTDEAALFSREFEDTKNRPEMGASNSSSFHPSNYKMLSQTAEISLNSAQVSEYEDAESEYGNRESTVFHSFLGLQQLKMESNSADLCDSKYSISLSDIYQEDFTAFGGNGFPTTSDRSKYSNSVGFIYEPHRKLCFSSENVLESGTTGIYSSHLQPSFFTSQPQILDDVPKQGDEIVGLLSSDKCKRTVFNNHLHSQEYCQELLVKSSCQRASDLPRSIDASTSHL 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20919638 20925574 - CrPI670011_10g010600.1 Cre10g1060 510362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1060 434 ProSiteProfiles CG-1 DNA-binding domain profile. 78 203 IPR005559 GO:0003677(InterPro)
Cre10g1060 434 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 77 385 - GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Cre10g1060 434 Pfam CG-1 domain 84 196 IPR005559 GO:0003677(InterPro)
Cre10g1060 434 SMART CG_1_2 81 198 IPR005559 GO:0003677(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1060 K21596 - cit:102621892 357.451