Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1091 ATGGCCGAGGCTGAATTGGAGAGGGGCGACGCCAATTGCGGCCTTGCTTCCATGGATTCCTCCGAGTCCCGATGGGTTTTTCAGGATGAAGATCAATCGGAGATCGACGACGACGACGACGACGACGACGAGGATAATGCAACGCGCCATCGTATGGATTTGGAATCTGAGGATGAAGATAATGTTGAGCAGAAATTGATTCGGACTGGCCCACGTATTGATTCTTTCGATGTCGAAGCCCTTGACGTCCCTGGTGCCCATAGAAATGAATACGAGGACTTCAGCGTAGGAAAGAAAATTGCTCTTGCTTTTCAGACCCTTGGAGTCGTATTTGGTGATGTTGGGACAAGCCCTCTGTATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAATGGAGACGAAGATGTGATTGGGGCATTATCGCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTTCTTGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTACTCCCGAATCAACTGCCTTCGGATACCCGAATATCAAGTTTTAGATTAAAGGTGCCATCAGCTGAATTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCCTGACCTTGAAGAAGCTTCTTTTGATGCTTGTTCTTGCTGGAACTGCTATGGTAATAGCCGATGGAGTTGTTACACCAGCAATGTCAGTAATGTCGGCTGTTGGTGGACTAAAGATTGCAGTGGATGCAATCAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTCTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTCGGTCCTGCATTATTTATATGGTTTTGTACACTTGCAGGCATTGGGATTTATAACCTTGTCATATATGATAGCAGTGTACTGAAGGCATTCAATCCTGTTCATATTTATTATTTCTTCAAGAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTCTTTTATGTGCTACAGGTTCCGAGGCAATGTTTGCAGATCTTTGCTATTTCTCTGTGCGGTCAATACAGCTTACATTTGTGTTTCTTGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCACAATGGAGCTGACCACGTATTTTTTAATTCTGTTCCCAAAAGTGCCTTTTGGCCAGTTTTTCTCATTGCCAATGTTGCTGCATTGATTGCCAGTCGGGCAATGACTACGGCTACCTTTTCATGTATAAAACAATCAACAGCACTTGGTTGTTTTCCTCGTCTTAAGATTATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCTGTTTGCCTGGTGGTCGTCTGCTCCATATCTAGCATGTATGAGATTGGAAATGCATATGGTATTGCTGAGCTGGGAGTGATGATGATGACAACTGTCTTGGTCACCATTGTTATGCTTCTTATATGGCAGATTAACATTATCATCGTTATGGTTTTTGCGATGATCTTTCTTGGGATAGAACTAATATTTTTCTCGTCTGTGTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTATTCGCAGTAATTATGTTTTTCATTATGTATATTTGGAACTACGGAAGCAAGCTCAAATATGAAACTGAAGTGAAGCAAAAGCTGTCAATGGATTTAATGCGAGAACTAGGGTGCAATCTCGGGACAATCAGAGCTCCTGGCATTGGTTTGCTCTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCAGTTCACTCAATGATCATATTTGTCTGCATCAAGTACGTACCAGTTCCTGTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGCCCAAAGAGTTATCACATCTTTCGTTGCATTGCCAGGTATGGTTACAAGGATGTTCGAAAAGAAAATCATCAGACGTTTGAGCAGCTCTTAATTGAAAGCCTTGAGAAATTCATCCGTAGAGAAGCACAAGAAAGGTCATTAGAGAGCGATGGAGATGATGATACTGATTCCGACGAGACCCGCTGCTCGCGATTTCTCGTGGGTCCCAATGGAAGTGTGTATTCGCTTGGCATTCCTCTCCTTGCTGAATTCAACGAGCCTACTAGACCCATAACTGAAGTCATCAACGTACCAGAAGAGGTGCAGCCAGTGGAATCTCCAGACCCCTCGATCCCAGATGCAGAGCAATCACTTGAGAGAGAGCTTTCTTTTATACGAAAGGCTAAAGAATCAGGAGTCGTTTACCTTCTTGGTCATGGAGATATTAGAGCACGAAAGGATTCTTGGTTTATTAAGAAGCTTATGATCAATTACTTCTATGCATTTTTAAGAAAGAACAGCAGGAGGGGTATTGCCAACTTGAGTGTACCCCACACCCACCTGATGCAGTGTGCTGCAACATCCCATCTGATTTCTGTGGCGGATTGGATTCAGAGGAAGCTTTTTCACACTTTCTCCTTGGTGTCTTCCATATTGGGTTGGTCACCATTGTAG 2631 42.95 MAEAELERGDANCGLASMDSSESRWVFQDEDQSEIDDDDDDDDEDNATRHRMDLESEDEDNVEQKLIRTGPRIDSFDVEALDVPGAHRNEYEDFSVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTAMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGIGIYNLVIYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATGSEAMFADLCYFSVRSIQLTFVFLVLPCLFLGYLGQAAYLISNHNGADHVFFNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLVTIVMLLIWQINIIIVMVFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDSDETRCSRFLVGPNGSVYSLGIPLLAEFNEPTRPITEVINVPEEVQPVESPDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLMINYFYAFLRKNSRRGIANLSVPHTHLMQCAATSHLISVADWIQRKLFHTFSLVSSILGWSPL 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 21538101 21552098 - CrPI670011_10g010910.1 Cre10g1091 510393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1091 876 MobiDBLite consensus disorder prediction 45 63 - -
Cre10g1091 876 Pfam K+ potassium transporter integral membrane domain 102 588 IPR053951 -
Cre10g1091 876 NCBIfam potassium uptake protein 102 844 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre10g1091 876 MobiDBLite consensus disorder prediction 1 63 - -
Cre10g1091 876 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 86 846 IPR003855 GO:0000325(PANTHER)|GO:0005774(PANTHER)|GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre10g1091 876 Pfam K+ potassium transporter C-terminal domain 603 842 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g1091 Cre-Chr10:21538101 Cre11g0535 Cre-Chr11:2351729 2.40E-249 dispersed
Cre10g1091 Cre-Chr10:21538101 Cre10g1217 Cre-Chr10:24847580 8.50E-162 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1091 - - - 0.0