Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1217 ATGGCTAATCGGAGCTCCGAACAAGTATCCGATGCCATTCTCGACATGTCGTCATCCGACACAATCGTAAAAGAAGAAGAAGAAGAAGAAGAAGTTGTTGCACTGTCGGTGTCGGAGAGGAAACTGTCATGGCAAAAGCTCCGACGATTCGACTCGTTGGATTTAGAGTCACGTAAACTCCATGGTCATGATGATCATCATCATTCCTATGCCAAGGAGAAGAAATGGAGTGTAATCTTACACTTAGCATTCCAAAGCATTGGCATAGTTTACGGCGACATCGGAACGTCGCCGTTGTACGTGTTCTCGAGCACATTTCCAGATGGAATAAAGCACAACGACGATATTTTAGGGGCGTTGTCGTTGATCGTTTACACCATAACTTTGATTCCTGTAATCAAGTATGTGTTTATTGTTTTGAGAGCAAACGACAACGGAGAAGGGGGAACCTTCGCATTGTACTCATTGATATGTCGATATGCAAAAGTGGGATTGATTCCGAATGCGGAGATTGAGGATCGAGAAGTGTCGAATTATCAATTAAGTTTGCCGAATGAAAGAGAGAAGAGAGCTTCAAGGATTCAATCAAAGCTAGAGAAAAGCCATTTTGCAAAGGTGTTTCTTCTATTTGCAACTATGCTTGGGACTTCCATGGTCATTGGAGATGGTGTTCTCACTCCTTGTATCTCAGTGTTATCTGCTGTGGGAGGGATCAAGGAGGCTACCCCTGCAATGACAGAAGGTAAGATTGTCTGGGCATCAGTAGGCATATTGGTGTGCCTATTCATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCAATTATCCTCATTTGGTTTGCTTTCAATGCTGGAATTGGTATCTACAACTTCATAAAATATGACCCAACTGTCATTAAAGCCTTAAATCCAAACTACATTTTTGAATACTTCCAAAGGAACAAAAAGGATGCTTGGATTTCTCTTGGTGGCATTGTTCTTGCCATTACAGGGACCGAAGCCTTGTTCGCCGACGTCGGGCATTTCAGCGTCCGATCGATCCAGCTAAGCATGTCAGCAGTGACCTACCCAGCTCTAATATTTGCTTACATAGGCCAAGCTTCGTTTCTTCGCAAGCATGATGATCTAGTGTCGGACACATTCTACAAGTCAATTCCTGGAAGTTTGTATTGGCCAGTGTTTGTTGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATTTCAGGAACATTCTCAATAATTCAACAATCACTTTCACTTGGATGCTTCCCAAGAGTTAAAGTGGTTCATACATCAGCTAAGTATGAAGGGCAAGTTTATGTTCCTGAGATAAATTACCTTTTGATGTTGGCTTGTGTTGGTGTTACTTTGGGGTTCAAGAACACTACAAAGATTGGGAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCTTTCTTAGTACTCGTTATGGTTATGATATGGAAAACTCATATCCTTTTCATAATCACTTACATTCTCATCATTGGTAGTGTGGAATTGGTGTATTTGAGTTCAGTCCTTTACAAGTTTGACCAAGGAGGCTATCTTCCTTTGGCTTTTGCAGCTGCTTTGATGACAATCATGTATGTGTGGAATAGTGTGTTTAGAAAGAAGTACTTTTATGAGCTCAATAACAAAATCTCTTCAGAAAAGCTCAATGAGATGGTGAATGCCACCAACTTTAGAAGAATTCCAGGCATTGCATTCTTCTACTCTGAGCTTGTTCAAGGCATCCCTCCCATCTTCAAGCATTACGTCGACCACATTCCTGCACTGCATTCTGTGCTCGTCTTCATCACCATTAAATCGCTTCCTGTGAGCAAGGTTCCGGCAGATGAACGTTTCCTCTTCCGACAAGTAGAGGCGAAGGAGATCGACGTGTTTCGTTGTGTTGTTCGATACGGGTACACAGATGTGCAGACAGAACAAGAATCGTTTGAAAAGATATTGATTGAAAGATTGGAAGAGTTCAAGAGAGAACAACGTAGATTGGTTAAAGGGGTAAATAAAGTTGAAAATGAGAATGAGGATGAGAAAGGATTTGGAGGAATTGGAGAAGTATGGAAGGATGGAGTTGTTCATTTAGTTGGTGAAAGTGAAGTGGTTGCTAAAAAAGGGGCAAGCTTTGGGAAGAGAATGATGATAAACTATGCATATAGCTTCTTGAAGAGGAATTTGAGGCAAACTGATCAAGTATTTGATATTCCTCGCAAGCATATGCTCAAAGTAGGAATGACTTGTGAACTTTAG 2301 41.37 MANRSSEQVSDAILDMSSSDTIVKEEEEEEEVVALSVSERKLSWQKLRRFDSLDLESRKLHGHDDHHHSYAKEKKWSVILHLAFQSIGIVYGDIGTSPLYVFSSTFPDGIKHNDDILGALSLIVYTITLIPVIKYVFIVLRANDNGEGGTFALYSLICRYAKVGLIPNAEIEDREVSNYQLSLPNEREKRASRIQSKLEKSHFAKVFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEATPAMTEGKIVWASVGILVCLFMVQRFGTDKVGYTFAPIILIWFAFNAGIGIYNFIKYDPTVIKALNPNYIFEYFQRNKKDAWISLGGIVLAITGTEALFADVGHFSVRSIQLSMSAVTYPALIFAYIGQASFLRKHDDLVSDTFYKSIPGSLYWPVFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYVPEINYLLMLACVGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLVMVMIWKTHILFIITYILIIGSVELVYLSSVLYKFDQGGYLPLAFAAALMTIMYVWNSVFRKKYFYELNNKISSEKLNEMVNATNFRRIPGIAFFYSELVQGIPPIFKHYVDHIPALHSVLVFITIKSLPVSKVPADERFLFRQVEAKEIDVFRCVVRYGYTDVQTEQESFEKILIERLEEFKREQRRLVKGVNKVENENEDEKGFGGIGEVWKDGVVHLVGESEVVAKKGASFGKRMMINYAYSFLKRNLRQTDQVFDIPRKHMLKVGMTCEL 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 24847580 24853513 + CrPI670011_10g012170.1 Cre10g1217 510519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1217 766 NCBIfam potassium uptake protein 82 765 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre10g1217 766 Pfam K+ potassium transporter C-terminal domain 582 766 IPR053952 -
Cre10g1217 766 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 64 765 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre10g1217 766 Pfam K+ potassium transporter integral membrane domain 82 569 IPR053951 -
Cre10g1217 766 Coils Coil 671 691 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0580 Cre-Chr9:5454313 Cre10g1217 Cre-Chr10:24847580 4.40E-300 dispersed
Cre10g1217 Cre-Chr10:24847580 Cre10g1582 Cre-Chr10:29861172 1.90E-165 dispersed
Cre07g1568 Cre-Chr7:31141401 Cre10g1217 Cre-Chr10:24847580 3.10E-227 transposed
Cre10g1091 Cre-Chr10:21538101 Cre10g1217 Cre-Chr10:24847580 8.50E-162 transposed
Cre11g0535 Cre-Chr11:2351729 Cre10g1217 Cre-Chr10:24847580 2.50E-190 transposed
Cre10g1217 Cre-Chr10:24847580 Cre09g0579 Cre-Chr9:5436441 5.50E-290 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1217 K03549 - csv:101215797 1292.33