Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1256 TGCTGCCAACATCTTCCGGAGTTGATTAAAATGGCATCATTTGCTAAAGAAAATGTAGAAAGTGGACAAGCAATTTCTAGTATTATTGGGACGGGAAAATGTGAAAGCTACTTCATTTTTAGTAATGAAACTTCCCTTGGGGATGCATTTCGGATATTCCTATACTTTATGGGCCTTGCATATTGTTTCGTTGGATTATCTGCTATTACTGCTCGATTTTTCCGGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTAGAGATAGATCCGCACACCAATACTGAAATTATTCGATATGAGAAGGTCTGGAACTTTACAATTGCAGATATCAGCTTACTGGCGTTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTTTGGGACCTGGAACACTGGTTGGTTCTGCTGCTTTCGACCTTTTTCCCATTCATGCGGTTTGCGTTGTAGTGCCTAAAGCAGGGGAGTTGAAAAAAATATCTGATATAGGAGTTTGGCTAGTTGAGCTCGCTTGGTCTTTCTGGGCTTATATTTGGCTATATATTATTTTGGAGGTGTGGACACCAAATGTAATAACTCTTTGGGAAGCTTTGTTGACTGTGCTACAGTATGGATTACTGCTTACACATGCTTACGCTCAAGATAAGCAATGGCCCTACTTGTCCTTTCCTTTGGCAAGAACTGAGAGGCCAGAGGAATGGGTGCCACCTGAGATTGCTATATGCCCACAGGATAATCCCTGTAGAGAGGAATTTCAAGCCCATGAGAATGAGCAGAGAACCATTGTTGACATTTTCTCTATCCATGATAAAGATGAGAAAGTGTATCATGAAGTTCCTGGACATGATGTTGCTGAATCCTCCTGTAGTAATTTTCCAGAGGAGATGGATGGAAAGGCTGACCACCCTCATGTGCTTAAAATTTGGAAACAACAGTTTGTGGATGCACTTTCGTTGGGAACTTCGGAATCAAAGAAGCTGAAAAACATTTATTTACGACTCGCAAGATTATGCTGGCAGTTGCTTCTTTTTCCATGGAGACTTTTGTTTGCTTTTGTACCTCCTTATCACATTGCTCATGGATGGCTTGCCTTTATTTGCTCCCTTATTTTCATCAGTGCGATAGCTTATGTCGTCACTAAGCTCACAGATTTAATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCAAGTGGAACTTCTTGGCCAGATTTAGTGGCTAGTAAGATTGCTGCCGAGCGCCAGACAACGGCAGACTCTGCCATTGCAAACATTACTTGCAGCAATTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGCTGATAAGCACAACATACAATTTCATAGCGTATAGAGAACCACTAAAGATAAAGGATGCAACAGGTCTGAGCTTCAGTTTGCTGGTGTTTTTTTCAACTTCTGTGGCTTGCATTGCTGTGCTTGTGTTTAGGCGTCTAACATTAGGTGCAGAACTTGGAGGGCCAAGGCTTTGGGCTTGGATTACATGTTTCTTTTTCATGTTGCTTTGGCTCATCTTTGTGGTGCTCTCTTCTCTCAAGGTTTCAGATATCATCTGA 1644 41.67 CCQHLPELIKMASFAKENVESGQAISSIIGTGKCESYFIFSNETSLGDAFRIFLYFMGLAYCFVGLSAITARFFRSMENVVKHSRKVVEIDPHTNTEIIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELAWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYGLLLTHAYAQDKQWPYLSFPLARTERPEEWVPPEIAICPQDNPCREEFQAHENEQRTIVDIFSIHDKDEKVYHEVPGHDVAESSCSNFPEEMDGKADHPHVLKIWKQQFVDALSLGTSESKKLKNIYLRLARLCWQLLLFPWRLLFAFVPPYHIAHGWLAFICSLIFISAIAYVVTKLTDLISCVSGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLISTTYNFIAYREPLKIKDATGLSFSLLVFFSTSVACIAVLVFRRLTLGAELGGPRLWAWITCFFFMLLWLIFVVLSSLKVSDII 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25518311 25526279 + CrPI670011_10g012560.1 Cre10g1256 510558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1256 547 PANTHER SODIUM/CALCIUM EXCHANGER 28 233 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
Cre10g1256 547 Gene3D - 331 541 IPR044880 -
Cre10g1256 547 Gene3D - 108 247 IPR044880 -
Cre10g1256 547 Pfam Sodium/calcium exchanger protein 375 539 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cre10g1256 547 Pfam Sodium/calcium exchanger protein 55 226 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1256 K03452 - csv:101205540 998.423