Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1311 ATGTCGGTGCCTGCGGCTTCCGTCACCGCAGGTATATTGGAACAGGTCTCTTACCGGTTTCCAAAACAGTTGATTGTATTGTGGTTTGTGATTTCCGTAACCAATGCCGATGTCCCCGACGTACCACCAGCAGCTTTGGTTGCACCTACTACTCGCAATATGCCTCTACCTGCAAAATTGCCTCTTCACCAACACCATCACCGAAAATATATGTCACCACAAAGTGCGCCAGAAGCTGGACTAGCGCCGTCATCTCCTCCTTACTATGGGCATCTTATCACTTCTGGTCACCCACCCACAAGTTCAAATTTTTCCAAACCACTGATGAAGAGTGGATCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGCTTACCTCAGCCACCACTTTCCCCTATTGCAGCAGCAGACTGTTGCAAACGTGACATGGTGCTAAAACGAGGAAGTGGTGATGACTGCCATTGTGTCTATCCCATAAAAATTGAACTCCTCCTCTTGAACGTATCACAGAATCCTAACTGGAAACTCTTTCTCGAAGAGTTAGCTTCTGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCAAGATTAAATATCTCAATGGACATTACTCCCCACGCTGGGATCAGCTTTTCTGCAGTCGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAAGTTCGTCTGGACCCTACACTGGTTGGCGATTACCATCTTCTCAATATTACCTGGTTTAAGCCTCCACCTCCTTCTGAAGCTCCTCTAGCTTCTGCATCACCTGTAGCAGCTCCAGCATACCATTTTCCAGCCTCAACATCACTGAGTTCTCCTAGTAAAGGACACCATTCTAATCTGACACTTATTCTTGGTATTGGCGCTGGTTTTTTGTTCGTTGCCATTCTTTTTGTGTTGATAATTTGCTTATGCACATCTCATCGTGGGAAGACTGAAGCACCTCCATTAGTAACTGAAAAACGAAGGGTTGAGGACAAAATGCCTGTGGCAGGAGCAGGATCTTTCCCTCATCCATCAAGTATGAGATTTCTAACTTATGAAGAACTTAAAGAAGCAACTAATAACTTTGAAGCAGCCAGCATATTGGGGGAGGGCGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTCGAAATGCTTAGCCGGTTACATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCACGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCTGCCCGAGGGCTTGCTTACCTTCACGAAGACTCACAACCTTGTGTGATACACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCCGACTTCGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGCACATTTGGATACGTCGCCCCTGAGTATGCAATGACGGGCCATCTACTTGTTAAAAGTGATGTTTATAGCTACGGAGTTGTACTTCTTGAGTTGCTCACCGGAAGGAAACCTGTAGATATGTCACAACCATCGGGACAAGAGAACCTGGTCACATGGGCGAGGCCGATTTTGAGAGACAAGGACCGGTTAGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGTGTCGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTACAGCGCGTTACAGAATACCAAGACTCCATGGTACCATCCTCCAACAACCGAACCAATCTAAGACAGTCGTCCACAACTTTCGAGTCTGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCTGGTTTAAGTGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2181 45.94 MSVPAASVTAGILEQVSYRFPKQLIVLWFVISVTNADVPDVPPAALVAPTTRNMPLPAKLPLHQHHHRKYMSPQSAPEAGLAPSSPPYYGHLITSGHPPTSSNFSKPLMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPIAAADCCKRDMVLKRGSGDDCHCVYPIKIELLLLNVSQNPNWKLFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVRLDPTLVGDYHLLNITWFKPPPPSEAPLASASPVAAPAYHFPASTSLSSPSKGHHSNLTLILGIGAGFLFVAILFVLIICLCTSHRGKTEAPPLVTEKRRVEDKMPVAGAGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSSNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26393469 26398177 - CrPI670011_10g013110.1 Cre10g1311 510613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1311 726 MobiDBLite consensus disorder prediction 667 708 - -
Cre10g1311 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1311 726 CDD STKc_IRAK 388 658 - -
Cre10g1311 726 ProSiteProfiles Protein kinase domain profile. 382 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1311 726 SUPERFAMILY Protein kinase-like (PK-like) 361 659 IPR011009 -
Cre10g1311 726 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524(InterPro)
Cre10g1311 726 FunFam Receptor-like serine/threonine-protein kinase ALE2 362 459 - -
Cre10g1311 726 PANTHER OS01G0750732 PROTEIN 150 699 IPR050885 -
Cre10g1311 726 Pfam Protein tyrosine and serine/threonine kinase 385 657 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1311 726 FunFam Receptor-like serine/threonine-protein kinase ALE2 460 677 - -
Cre10g1311 726 Gene3D Transferase(Phosphotransferase) domain 1 460 682 - -
Cre10g1311 726 Gene3D Phosphorylase Kinase; domain 1 363 459 - -
Cre10g1311 726 MobiDBLite consensus disorder prediction 100 121 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0627 Cre-Chr7:4058882 Cre10g1311 Cre-Chr10:26393469 9.10E-87 dispersed
Cre08g1301 Cre-Chr8:26089121 Cre10g1311 Cre-Chr10:26393469 4.20E-72 dispersed
Cre09g0060 Cre-Chr9:870886 Cre10g1311 Cre-Chr10:26393469 4.80E-104 dispersed
Cre10g1311 Cre-Chr10:26393469 Cre10g2179 Cre-Chr10:36331013 9.70E-87 dispersed
Cre10g1883 Cre-Chr10:33411964 Cre10g1311 Cre-Chr10:26393469 1.90E-70 dispersed
Cre11g1103 Cre-Chr11:8513437 Cre10g1311 Cre-Chr10:26393469 6.20E-42 dispersed
Cre10g1311 Cre-Chr10:26393469 Cre03g1825 Cre-Chr3:35163419 6.10E-105 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64464 PF00069 Pkinase 6.20E-44 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1311 - - - 0.0