Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1311 | ATGTCGGTGCCTGCGGCTTCCGTCACCGCAGGTATATTGGAACAGGTCTCTTACCGGTTTCCAAAACAGTTGATTGTATTGTGGTTTGTGATTTCCGTAACCAATGCCGATGTCCCCGACGTACCACCAGCAGCTTTGGTTGCACCTACTACTCGCAATATGCCTCTACCTGCAAAATTGCCTCTTCACCAACACCATCACCGAAAATATATGTCACCACAAAGTGCGCCAGAAGCTGGACTAGCGCCGTCATCTCCTCCTTACTATGGGCATCTTATCACTTCTGGTCACCCACCCACAAGTTCAAATTTTTCCAAACCACTGATGAAGAGTGGATCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGCTTACCTCAGCCACCACTTTCCCCTATTGCAGCAGCAGACTGTTGCAAACGTGACATGGTGCTAAAACGAGGAAGTGGTGATGACTGCCATTGTGTCTATCCCATAAAAATTGAACTCCTCCTCTTGAACGTATCACAGAATCCTAACTGGAAACTCTTTCTCGAAGAGTTAGCTTCTGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCAAGATTAAATATCTCAATGGACATTACTCCCCACGCTGGGATCAGCTTTTCTGCAGTCGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAAGTTCGTCTGGACCCTACACTGGTTGGCGATTACCATCTTCTCAATATTACCTGGTTTAAGCCTCCACCTCCTTCTGAAGCTCCTCTAGCTTCTGCATCACCTGTAGCAGCTCCAGCATACCATTTTCCAGCCTCAACATCACTGAGTTCTCCTAGTAAAGGACACCATTCTAATCTGACACTTATTCTTGGTATTGGCGCTGGTTTTTTGTTCGTTGCCATTCTTTTTGTGTTGATAATTTGCTTATGCACATCTCATCGTGGGAAGACTGAAGCACCTCCATTAGTAACTGAAAAACGAAGGGTTGAGGACAAAATGCCTGTGGCAGGAGCAGGATCTTTCCCTCATCCATCAAGTATGAGATTTCTAACTTATGAAGAACTTAAAGAAGCAACTAATAACTTTGAAGCAGCCAGCATATTGGGGGAGGGCGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTCGAAATGCTTAGCCGGTTACATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCACGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCTGCCCGAGGGCTTGCTTACCTTCACGAAGACTCACAACCTTGTGTGATACACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCCGACTTCGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGCACATTTGGATACGTCGCCCCTGAGTATGCAATGACGGGCCATCTACTTGTTAAAAGTGATGTTTATAGCTACGGAGTTGTACTTCTTGAGTTGCTCACCGGAAGGAAACCTGTAGATATGTCACAACCATCGGGACAAGAGAACCTGGTCACATGGGCGAGGCCGATTTTGAGAGACAAGGACCGGTTAGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGTGTCGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTACAGCGCGTTACAGAATACCAAGACTCCATGGTACCATCCTCCAACAACCGAACCAATCTAAGACAGTCGTCCACAACTTTCGAGTCTGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCTGGTTTAAGTGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA | 2181 | 45.94 | MSVPAASVTAGILEQVSYRFPKQLIVLWFVISVTNADVPDVPPAALVAPTTRNMPLPAKLPLHQHHHRKYMSPQSAPEAGLAPSSPPYYGHLITSGHPPTSSNFSKPLMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPIAAADCCKRDMVLKRGSGDDCHCVYPIKIELLLLNVSQNPNWKLFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVRLDPTLVGDYHLLNITWFKPPPPSEAPLASASPVAAPAYHFPASTSLSSPSKGHHSNLTLILGIGAGFLFVAILFVLIICLCTSHRGKTEAPPLVTEKRRVEDKMPVAGAGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSSNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR | 726 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26393469 | 26398177 | - | CrPI670011_10g013110.1 | Cre10g1311 | 510613 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1311 | 726 | MobiDBLite | consensus disorder prediction | 667 | 708 | - | - | |
Cre10g1311 | 726 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 506 | 518 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1311 | 726 | CDD | STKc_IRAK | 388 | 658 | - | - | |
Cre10g1311 | 726 | ProSiteProfiles | Protein kinase domain profile. | 382 | 660 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1311 | 726 | SUPERFAMILY | Protein kinase-like (PK-like) | 361 | 659 | IPR011009 | - | |
Cre10g1311 | 726 | ProSitePatterns | Protein kinases ATP-binding region signature. | 388 | 410 | IPR017441 | GO:0005524(InterPro) | |
Cre10g1311 | 726 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 362 | 459 | - | - | |
Cre10g1311 | 726 | PANTHER | OS01G0750732 PROTEIN | 150 | 699 | IPR050885 | - | |
Cre10g1311 | 726 | Pfam | Protein tyrosine and serine/threonine kinase | 385 | 657 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1311 | 726 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 460 | 677 | - | - | |
Cre10g1311 | 726 | Gene3D | Transferase(Phosphotransferase) domain 1 | 460 | 682 | - | - | |
Cre10g1311 | 726 | Gene3D | Phosphorylase Kinase; domain 1 | 363 | 459 | - | - | |
Cre10g1311 | 726 | MobiDBLite | consensus disorder prediction | 100 | 121 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g0627 | Cre-Chr7:4058882 | Cre10g1311 | Cre-Chr10:26393469 | 9.10E-87 | dispersed | |
Cre08g1301 | Cre-Chr8:26089121 | Cre10g1311 | Cre-Chr10:26393469 | 4.20E-72 | dispersed | |
Cre09g0060 | Cre-Chr9:870886 | Cre10g1311 | Cre-Chr10:26393469 | 4.80E-104 | dispersed | |
Cre10g1311 | Cre-Chr10:26393469 | Cre10g2179 | Cre-Chr10:36331013 | 9.70E-87 | dispersed | |
Cre10g1883 | Cre-Chr10:33411964 | Cre10g1311 | Cre-Chr10:26393469 | 1.90E-70 | dispersed | |
Cre11g1103 | Cre-Chr11:8513437 | Cre10g1311 | Cre-Chr10:26393469 | 6.20E-42 | dispersed | |
Cre10g1311 | Cre-Chr10:26393469 | Cre03g1825 | Cre-Chr3:35163419 | 6.10E-105 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64464 | PF00069 | Pkinase | 6.20E-44 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1311 | - | - | - | 0.0 |