Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1327 | ATGGAGGAAACTTTTGTTCCTCTTCGTGGAATTAAGAATGACCTGAAAGGGAGATTAGTGTGTTACAAACAAGACTGGACTGGTGGTTTGAGAGCTGGATATAGGATTTTGGCTCCCACCACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAGTACTGATGGGGTGTTGACTGCAGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGGATCATTCACTCCATTGTTGGAGGTCAACCTTTGCTCATCTTGGGTGTTGCGGAGCCTACGGTTATTATGTACACCTTCATGTTTAATTTTGCTAAGGAACGTCCTGAGTTGGGCCGGAATTTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGTGCTTGTTCCATCATCAATAGGTTCACACGTCTGGCTGGTGAACTGTTCGGTTTGCTTATCGCGATGCTTTTCATGCAGCAAGCGATCAAAGGACTTGTGGATGAGTTTCGCATCCCAGAACGGGAAAATCCAAAATTGCTCCAGTTTATACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTACTATCATTTGGCCTTCTACTCACTGCTTTAAGGAGCCGAAAAGCCCGGTCATGGCGATATGGATCAGGTTCGCTCAGAAGCTTGATAGCAGACTATGGAGTACCGCTCATGGTTCTTGTTTGGACAGGTATTTCTTATATACCTTCAAAAAGTGTCCCACAAGGAATCCCAAGGCGACTCTTCAGCCCCAATCCATGGTCTCCCGGTGCGTATGAAAATTGGACTGTTATTAAGGATATGCTTGACGTTCCAGTTTTCTATATCTGTGGAGCTTTCATCCCCGCTACGATGATTGCGGTGCTTTACTATTTTGACCATAGTGTTGCATCTCAACTTGCTCAGCAGCAAGAGTTCAATTTGAGGAAGCCATCTTCTTACCATTATGATTTACTTCTATTGGGGTTCTTGACCTTAATATGTGGTCTTCTTGGAATCCCTCCATCCAATGGAGTCATCCCACAATCTCCAATGCATACAAAGAGCCTGGCTACTCTCAAACACCAGTTGCTGCGGAATAAACTTGTAGAGACAGCACGAAGTAGTATGAGAAAGAATGCTAGCTTAGGACAGTTGTATGGAAGTATGCAACAAGCATATCAACAAATGCAAACCCCCTTGATCTACCAACAGCCTTCAATTCGTGGACTGAATGAGCTAAAAGAGACAACCATTCAAGCAGCTTCTAGTATGGGCAGCTTTGATGCTCCGGTCGACGAGACAATATTTGATATCGAAAAGGAAATTGATGATTTATTGCCTGTTGAGGTGAAAGAACAACGGGTCAGTAATTTGCTTCAAGCTATAATGGTGGGAGGATGCGTTGCAGCCATGCCAGTCCTGAAAAAGATCCCAACCTCAGTTCTATGGGGTTACTTCGCTTTTATGGCCATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAAAGAATCTTGTTGCTCTTTACTGCACCCAGCAGAAGATACAAAGTTCTTGAGGATTACCATGCGACTTTCGTCGAAACCGTGCCATTCAAATCCATTGTACTTTTTACCATTTTTCAAACAGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCGATTGCCGGGGTGATGTTTCCTCTGATGATCATGCTCCTCGTCCCTGTAAGACAATACCTTCTTCCCAAGTTTTTCAAAGGGGCACATCTCCAAGACCTTGATGCTGCCGAATACGAAGAAGCACCAGCTTTACCGTTCAATCTTGCAACAGAGGCCGAGCTGGGCGCTGGAGCATCTTTCGGTGGGGATGGAGAGATTTTAGATGAGGTTATCACCCGAAGCCGCGGTGAGTTTAGGCGTATTAGCAGTCCTAAAATCACAAGCTCCACAGCAACACCAATATCTGACCGAAAAAGTATAGACAGCCCTCATCGCTCTTTCAGCCCTCGGTTGAGCGAGCTAAGAGGAGAGCACAGTCCTCGAGCCGGTGGACGAGGGACACCAGGTCAGAGGAGTGCAGAAGCTAAACCATCCAGTCTGGGAAAGAGCCCTCTTAATAACACAGCATCAAAGTAA | 2154 | 45.22 | MEETFVPLRGIKNDLKGRLVCYKQDWTGGLRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVDEFRIPERENPKLLQFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGSLRSLIADYGVPLMVLVWTGISYIPSKSVPQGIPRRLFSPNPWSPGAYENWTVIKDMLDVPVFYICGAFIPATMIAVLYYFDHSVASQLAQQQEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGSMQQAYQQMQTPLIYQQPSIRGLNELKETTIQAASSMGSFDAPVDETIFDIEKEIDDLLPVEVKEQRVSNLLQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIVLFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGAGASFGGDGEILDEVITRSRGEFRRISSPKITSSTATPISDRKSIDSPHRSFSPRLSELRGEHSPRAGGRGTPGQRSAEAKPSSLGKSPLNNTASK | 717 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26747426 | 26751028 | + | CrPI670011_10g013270.1 | Cre10g1327 | 510629 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1327 | 717 | MobiDBLite | consensus disorder prediction | 648 | 717 | - | - | |
Cre10g1327 | 717 | MobiDBLite | consensus disorder prediction | 664 | 686 | - | - | |
Cre10g1327 | 717 | PANTHER | ANION EXCHANGE PROTEIN | 5 | 639 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) | |
Cre10g1327 | 717 | MobiDBLite | consensus disorder prediction | 648 | 663 | - | - | |
Cre10g1327 | 717 | Pfam | HCO3- transporter integral membrane domain | 8 | 180 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Cre10g1327 | 717 | Pfam | HCO3- transporter integral membrane domain | 202 | 373 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Cre10g1327 | 717 | Pfam | HCO3- transporter integral membrane domain | 460 | 602 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Cre10g1327 | 717 | Gene3D | Helical hairpin bin | 18 | 60 | - | - | |
Cre10g1327 | 717 | MobiDBLite | consensus disorder prediction | 698 | 717 | - | - | |
Cre10g1327 | 717 | FunFam | probable boron transporter 2 | 18 | 60 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g1263 | Cre-Chr1:25832419 | Cre10g1327 | Cre-Chr10:26747426 | 0.00E+00 | dispersed | |
Cre09g2018 | Cre-Chr9:39283097 | Cre10g1327 | Cre-Chr10:26747426 | 1.90E-217 | dispersed | |
Cre10g1327 | Cre-Chr10:26747426 | Cre07g1645 | Cre-Chr7:31889726 | 1.70E-216 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1327 | K24194 | - | csv:101205388 | 1393.25 |