Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1354 ATGTTGAGCTCCGGCAACCTCACCGTCATCTCCTCCAGTGAATTCCCGTCTCAGAGATTGCTTGCACGGCAGCTCTTCTTACCTGACATCCAAATTTTAGAGATCTTCATTGCAATTTCTGTTTTTACAGCAATAAAATCATTGAGACAAAGTAGGAAACAGGGGTTACCTGTATGGCCGATCGTCGGAATGTTACCGTCTTTAGTCATGGGACTTCGAAGCAACTTGTATGAATGGATCACCGAAGTTCTGTACCATCAAAATGGAACTTTCAGATTCAAAGGACCATGGTTTAGTATCTTGAATTGTGTTGTAACTTCAGATCCTCGTAACATTGAGCACATTCTGAAAACAGAGTTTCCCAAATATCCAAAAGGCTCCTTCTTCCGTGAAACAGTCCGTGACCTTCTTGGCGACGGAATCTTCAACGCTGACGGCGAGGTTTGGCACCAGCAGAGGAAGATAGCCAGCATCGAGTTCCATTCAACAAAGTTCCGGCAACTCACCGTGGAGTCTCTTCACGAGTTAGTCCACTCTCGGCTCCTCCCTGTTTTACACAGGCATTTCGTCGAACAGTTGGTGCCCATTGATCTCCAAGACATTCTTCTCCGCCTAACTTTCGACAATGTCTGTATGATCGCATTCGGCGTCGATCCCGGCTGTTCGAGCCCTAATTTACCAGCGATTCCTTTCGCCAATGCCTTCGAGGTGGCAACGGAAGCCACCGTCCTTCGATTCGTAACTCCGAAATTCATATGGAAAACGATGAGGCATTTCAATTTAGGAACAGAAAAGAGACTCAAATTTGCCCTAAAAGAGGTCAATCAATTCGCGAAGAACGTAATTGAAAAGAGAAAAAGAGAGAATGGCAATGAAATCAAGAGATCCGACCTGCTATCGGTGTTTATGGGACTGAAGGACGAGAACGGGGAGCCATATTCGGAGAAGTTCTTGAAAGATATATGCGTGAATTTTATACTTGCCGGGAGAGATACCTCGTCGGTGGCGTTAAGTTGGTTCTTTTGGCTGATTGATCGGAATCCGGAAGTGGAAGAGAGGATTCTGGCGGAGATCTGCCGGATATTGGAGAAGAGAGGAGAGGCGGCGGCGGTGGAATCGTCGGGCGGCGATGTGGCGTTTGAAGTAGAGGAGATAAAGAAGATGGAATATTTGCAGGCTGCTCTTTCTGAAGCTTTGAGATTGTTCCCTTCGGTGCCTGTTGATCACAAGGAGGCCATTAAAGATGATGTATTACCAGATGGAACAAAGCTAAAGAAAGGAACAAAAGTGATCTATGCAATATATGCAATGGGCAGAACAGAGGCAATATGGGGAAAAGATTGCAACGAGTTCAAGCCGGAGAGATGGTTAAGAGATGGTCGATTTATGGCCGAGTCAGCATACCGGTTCACGGCCTTCAACGGCGGGCCTCGACTATGCTTGGGAAAGGATTTTTCATATTACCAAATGAAGTATACCGCGGCCTCCATCATCCTCCGCTACCGTGTTAGGGTGGCGGAGAAGCACCCTGTGGTGCCAAAGCTTGCTCTGACAATCCACATGAAATATGGGTTGAAGGTGAATATGTTTAAACGTGACAAGGAAGAGCTTCAAAAATATTTCAAAAGTAAATAA 1635 45.99 MLSSGNLTVISSSEFPSQRLLARQLFLPDIQILEIFIAISVFTAIKSLRQSRKQGLPVWPIVGMLPSLVMGLRSNLYEWITEVLYHQNGTFRFKGPWFSILNCVVTSDPRNIEHILKTEFPKYPKGSFFRETVRDLLGDGIFNADGEVWHQQRKIASIEFHSTKFRQLTVESLHELVHSRLLPVLHRHFVEQLVPIDLQDILLRLTFDNVCMIAFGVDPGCSSPNLPAIPFANAFEVATEATVLRFVTPKFIWKTMRHFNLGTEKRLKFALKEVNQFAKNVIEKRKRENGNEIKRSDLLSVFMGLKDENGEPYSEKFLKDICVNFILAGRDTSSVALSWFFWLIDRNPEVEERILAEICRILEKRGEAAAVESSGGDVAFEVEEIKKMEYLQAALSEALRLFPSVPVDHKEAIKDDVLPDGTKLKKGTKVIYAIYAMGRTEAIWGKDCNEFKPERWLRDGRFMAESAYRFTAFNGGPRLCLGKDFSYYQMKYTAASIILRYRVRVAEKHPVVPKLALTIHMKYGLKVNMFKRDKEELQKYFKSK 544
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 27166399 27169576 - CrPI670011_10g013540.1 Cre10g1354 510656
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1354 544 FunFam Cytochrome P450 46 535 - -
Cre10g1354 544 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PANTHER CYTOCHROME P450 46 525 - -
Cre10g1354 544 SUPERFAMILY Cytochrome P450 55 532 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 Gene3D Cytochrome P450 52 543 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1354 544 CDD CYP86A 91 525 - -
Cre10g1354 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre10g1354 544 Pfam Cytochrome P450 56 515 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g2262 Cre-Chr9:41802119 Cre10g1354 Cre-Chr10:27166399 4.00E-122 dispersed
Cre10g1354 Cre-Chr10:27166399 Cre10g1764 Cre-Chr10:32039833 1.40E-101 dispersed
Cre10g1354 Cre-Chr10:27166399 Cre09g0432 Cre-Chr9:4158133 1.40E-210 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1354 K15402 - cit:102607755 770.0