Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1390 | ATGGCGTTGGCCAGTCGCATCCGATCCACCATCCCTGCCCTCAGTAAGTTTTGGAGATCCGAATCCTCATGCACTCCGCTCTCAAGGACTTATGCCGCTACATCAGGGAAAAATGAAGGAAAAGTGAAGGTGCCTATTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTCTGTATCTAGCTGCAGTAAAAGCTAATTCTTTAGAAAAGGTGGAGTCTGAGCTTGTTAACCTTGTTGAGGCTATTAAGAAAAGCCCTACATTTTCTCAGTTCACAATGGACCTGTCAGTTCCAGCGGAAACTAGAGTTAAGGCTATCAACGAAATTTCTGCTGAAGCTAAATTTTCAGACACTGTAAAGAACTTTTTGGTTGTGCTGGCTGAGAATGGGAGGCTGAGATATGTAGATAGCATAGCAAAGAGATTTTTGGAGTTGACCATGGCTCATAAGGGAGAAGTTAAAGCAGTTGTTACAACTGTTATTCCCATTCCAGCACAAGAAGAGAAGGAGTTGAAGGAGACATTGCAAGATATAATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAGAAGATTGATCCCAGCATACTTGGTGGTCTAGTTGTAGAATTTGGCGAGAAGGTATTTGACATGTCCATTAAAACCCGAGCACGTCAAATGGAGAGCACTGATCTGCTTTTTCTTATGATGACCCCATTTCTTGGGGTCTCAAATGCAGAAGAGATAGGATCTAAACTTGCAAACTCTGTTCTTGATCAGGAAAAAAAAAAGTACCAGATGTTGGAAGAGCACACCAATATTATAAAAATTTTCCTTGATAAATTTGGGGTGTCGAAGGCCCCACTTCTTTCCGGATGGTTTTATGATCCATCTTCTGGGGGAAGTTTCACCCTCTCCAAGTAA | 903 | 42.64 | MALASRIRSTIPALSKFWRSESSCTPLSRTYAATSGKNEGKVKVPIALFGGSGNYASALYLAAVKANSLEKVESELVNLVEAIKKSPTFSQFTMDLSVPAETRVKAINEISAEAKFSDTVKNFLVVLAENGRLRYVDSIAKRFLELTMAHKGEVKAVVTTVIPIPAQEEKELKETLQDIIGQGKKVKLEQKIDPSILGGLVVEFGEKVFDMSIKTRARQMESTDLLFLMMTPFLGVSNAEEIGSKLANSVLDQEKKKYQMLEEHTNIIKIFLDKFGVSKAPLLSGWFYDPSSGGSFTLSK | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 27606565 | 27611645 | - | CrPI670011_10g013900.1 | Cre10g1390 | 510692 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1390 | 300 | ProSitePatterns | ATP synthase delta (OSCP) subunit signature. | 186 | 205 | IPR020781 | GO:0015986(InterPro)|GO:0016020(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | NCBIfam | ATP synthase F1 subunit delta | 54 | 221 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | PRINTS | ATP synthase delta subunit signature | 121 | 132 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | PRINTS | ATP synthase delta subunit signature | 184 | 199 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | PRINTS | ATP synthase delta subunit signature | 199 | 217 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | PRINTS | ATP synthase delta subunit signature | 51 | 70 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | PRINTS | ATP synthase delta subunit signature | 132 | 146 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | Pfam | ATP synthase delta (OSCP) subunit | 53 | 222 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | Hamap | ATP synthase subunit delta [atpD]. | 47 | 226 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | Gene3D | - | 52 | 144 | IPR026015 | - | |
Cre10g1390 | 300 | PANTHER | ATP SYNTHASE DELTA CHAIN | 1 | 222 | IPR000711 | GO:0000274(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0042776(PANTHER)|GO:0045261(PANTHER)|GO:0046933(PANTHER)|GO:0046933(InterPro) | |
Cre10g1390 | 300 | SUPERFAMILY | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 52 | 153 | IPR026015 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0235 | Cre-Chr8:6062838 | Cre10g1390 | Cre-Chr10:27606565 | 6.00E-09 | transposed | |
Cre10g1390 | Cre-Chr10:27606565 | Cre09g0397 | Cre-Chr9:3905772 | 1.20E-83 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1390 | K02137 | - | rcu:8272168 | 317.775 |