Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1435 | ATGGAGAAGAAGACTTATCCGATTGGTGAAGATTATTATATTCTGTATGAGGAGGTCGGGCAGGGTGTGAGCGCTTCAGTTCACCGTGCTCTTTGTAAACCTCTTAACGAGATCGTCGCCATTAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCGAATGTCCTTAAATCACACTGTTCTTTTGTCAATGGCCATGATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAAGTGGTCATAGCAACAGTATTGCGAGAAGTATTGAAGGGGGTTGAATATCTTCATAATCATGGACATATACATCGGGATATCAAAGCAGGGAATATTCTTATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCTGCTTGTCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTCGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAACGCACCTCCAGGGCTTGATTATGAGAGGGATAAAAAATTCTCAAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGGCCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAGGCAAGCCCGATCAAATGATTACATTGCACGCACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTCAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTATCTCAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAGTCAATAAGTGAAATCAGTGAAGTAGGGAGCTCAAATTCCTTATGTGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATAATGAAGAGAATGGCATGCTGCGGAGACAACCCTCCATGAAAGCAAATGACACAGTAGAGGGTAAAAAATCTATCAATGAATCAACAATTATTGGTTCTTCCTCTCAACATTATTCTTCACCCATTGAGAATGGCTCCAGTGAGGAGTTTCATTTGGAGAGCAGCAAAAGAATTTTGGGGAATACTCCGAATTCTAGCCAACATAAAAGAAGTATTTCTTCTAATACCGCTATTCAACAAGAAATCAGTTCACCACTGAACAGAAGAGAGAGTTATGAGACAGAAAAGAATGGTGCAAATGGCAGTCTTGCAATTGGAATGACTTCTCAGGCGGTAGATGATGTACTTTCTGATTCTCATTTTAAAGATCCCAAGTCATCATTAAGTCCAGCAACAAATGACGAGGAACAGGATGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACCTCGGAGAGTGTTGATGTAGAAAAGGCAGCTGCATCCCCTATTTTGCAAAAAAGTCACAGTATGCAGGTTGGTAATTCTGAGGTGATTACCTCAAATTCTGCTACTCCTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACCTTCATCTGATGCTATACCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAATCGCAATCGGAGAATTTTCAGCTGATGGCGTAGTTGATGTCTCAGCGGCCCATATAACAGCAACGGAAAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGAGTTACAGTGGAGGTTGAAGAAGATGGAACCTGAGGAAATATGGAAATGGGATCTGGGAGAAAGAAGGAGGCCGCCACCCACCGAATCAATCTACTCCAAATTTGCATTTCAGTCCCTTCATTCTGATAAAATTTGTTCTAGGAAGAAGAAATGTAAGGCAGTAAAGGATGATATGATGAGAGAAGAAGGTAACCTTACAGGTCCTTTCCACTGTAGTATTGTTCTTCGGCTTGATATGGTTTTCTTCAAAGCTGTGTTCCTTCTCCTGTTTCAGTATCTGGTTTTGAATTCTGGGACTCCAGTTATTATAGGTCACCACTACCCTCCTCATAAGTCCTTGCTCACTGATAAAGCAGCCCTCCTTGCCTTCAGGAAGTGCATCATACACGACCCCACTTCCACTCTAGCTAACTGGATTGAGGCTATTGATGTATGCAACTTCACTGGTGTTGCTTGTGACCGACACCGTCATCGGGTATCAAAGCTCAGCTTGATTGATGTTGGACTTGTGGGAAAGATTCCACCCTTCCTCTCCAATCTCACGGGTCTTCGAATTCTGGATATTGTTAACAGTTATCTTTTTGGGGAAATTCCTTCTGAACTTTTTTCTCTTCGAAATCTTCACCGCCTTCGCCTCGACAGCAACAGTTTGGAAGGTCCCATACCAACTTCCCTTGCTAGTTTGTCCAGGCTTACTGTAATAAGTCTTAGGGAGAACAGGCTAAATGGCACAGTTCCACCTTCTCTTTTTTCTAATTGCACGTCGTTGCTTAATGTAGACCTTTCCAACAACTTCTTAACAGGAAGAATTCCAGAAGAAATTGGAAATTGTCCAAAGCTGTGGAATCTCAATCTGTACAACAACCAGTTCAGTGGAGATCTTCCTCTTTCTTTAAGAAACACTTCGCTCTATAACTTGGATGTCGAATATAATCATCTTTCTGGCGAACTGCCTGCAGTGCTTGTAGAAAACCTGCCTTCACTTAGCTTCCTTCATTTATCAAATAATGATATGGTAAGCCACGATGGAAATACCAATCTTGAACCGTTCATTACTTCTCTTAGAAACTGCAGTAGTTTAGAGGAGCTTGAATTGGCTGGGATGGGGCTTGGAGGGAGGCTGCCCAGTTCTATTGGTCATCTGGGTGTCAATTTTTCAGTTCTGTCTTTGCAGGAAAACCAGATATTTGGATCAATTCCTCCAAATTTAGCCAAGCTTTCCAACCTTGCAGGGCTGAATTTGACATCAAATCTACTAAACGGAACAATTCCTGCAGAGATAAGCAGGTTGTCAAAATTGGAGCAGCTTTTCTTATCACACAACCTCTTCACTTCAGACATTCCAGAAGCATTAGGCGAGTTGCCACATCTTGGATTGTTGGATCTATCTCACAACCAACTTTCAGGAGAAATCCCAGAAAGTATTGGAAATTTAACTCAGATGATTTATTTGTTTCTCAACCACAACCTCTTGTCTGGAACAATACCTTTAGCGTTGGTAAAGTGCACAGGTCTACAAAAGCTGGACTTATCTTTCAACATGTTATCTGGAAGTATTCCTCGAGAGATCTTAGGCTTGCAAGAGATAAGAATTTTTATCAACCTTTCTCACAACAATTTTCAAGGAAACTTGCCCATTGAGCTTAGCAAGCTGAAAAATGTTCAAGAGATGGACCTTTCATCCAATAACCTCACTGGAAGCATCTTCCCTCAGATATCAAGTTGCATTGCACTGAGGTTACTAAATTTTTCAAATAATTCCCTCCAAGGTCATCTTCCAGATTCCCTAGGTGAACTCGAGAACCTTGAATCATTTGACATTTCAAAAAACCAATTGTCAGGCATGATTCCAGCCAGTCTAGGTAAGCTCCAATCTCTCACTTACCTGAATCTTTCATTCAATAACTTCCAAGGAATGATTCCAAGAGAGGGATTTTTCAAATCCTCCACACCTCTGTCATTTTTGAACAATCCACTAATTTGTGGGACAATTCCTGGAATGCCAGCCTGTTCTGGCAAGAGAAATCGGTTTCAATCACCTGTATTCTTGACTATATTCATTTTAATCATATGCATATCATCTTTCTTATCAACAATATGCTGTGGGATTGCTTGTCAACGTCTAAAAGCAATTGTTTCAGCACGAAATAGTGAGTCATCAAGGAGATCAAAGATGCCAGATTTTATGCACAATTTTCCAAGAATAACAAGCAGGCAACTATCAGAGGCCACTGGAGGTTTTGATGAACGGAGACTAATTGGTTCAGGCAGCTATGGACAAGTCTATAAAGGCGTTCTTCCAGATGGAACAACTGTAGCTGTTAAGGTTTTGCATACACAATCTGGAAACTCCACAAAGAGTTTTAACAGAGAATGCGAAGTTTTGAAGCGAATTCGCCACAGAAACCTTATAAGAATTATAACAGCTTGTAGTCTTCCGGATTTTAAAGCTCTAGTTCTACCATATATGGCAAATGGAAGCTTGGATAACCATCTATATCGACGTTCACCTACCAGCTCGGCTTCGGGTTCTTCAGATTTAAACCTTATTGAGAGGGTGAATATATGCAGTGATATAGCTGAAGGAATGGCATACCTGCATCATCATTCTCCAGTCAGAGTCATACACTGTGATTTAAAGCCAAGTAATGTACTTCTAAAGGATGACATGACAGCCCTTGTTTCTGACTTCGGGATCTCAAGGCTAATGACCCCTGGAATTGGAAGCGCAACTGTTGAAAACATGGGAAAGTCAACTGCAAACATGTTAACTGGATCAATTGGATATATTGCACCAGAGTACGGATTTGGTTCTACAGCCTCCATGAAAGGAGACGTTTACAGCTTCGGCGTGCTAGTTCTAGAGATGGTAACAAGAAAAAGGCCAATAGACGACATGTTTGTTGAAGGGCTAAGTTTACATAAGTGGGTGAAGAGTCATTACTACGGCAGAGTAGAAAAAGTAGTGGATTATTCTCTACAGAGAGCTTCGAGAGATGAATCACCTGAAATGAAGAAAATGTGGGAAGTGGCAATCCGAGAGCTAATCGAATTAGGTTTGCTCTGCACTCAAGAATCTCCATCCACAAGACCAACAATGCTGGATGCTGCTGATGACTTGGATCGATTGAAGAGATACCTTAATGGTGGCGACACCACAACAACATTTGCTTCATCACTTGGAATTTCGTCCTCCACTCTTGGCGATGACTCCAATTACTCCCCACAAATCGCCGTTGACAGAAACATCTAG | 5268 | 41.21 | MEKKTYPIGEDYYILYEEVGQGVSASVHRALCKPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHDLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFRQARSNDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEISEVGSSNSLCALDVQEKKLQGQNSSEISDNEENGMLRRQPSMKANDTVEGKKSINESTIIGSSSQHYSSPIENGSSEEFHLESSKRILGNTPNSSQHKRSISSNTAIQQEISSPLNRRESYETEKNGANGSLAIGMTSQAVDDVLSDSHFKDPKSSLSPATNDEEQDEKAKAPVIQQKGRFKVTSESVDVEKAAASPILQKSHSMQVGNSEVITSNSATPLPSNLPTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMRQIAIGEFSADGVVDVSAAHITATEKSLLEAAHEREKDLLNEVTELQWRLKKMEPEEIWKWDLGERRRPPPTESIYSKFAFQSLHSDKICSRKKKCKAVKDDMMREEGNLTGPFHCSIVLRLDMVFFKAVFLLLFQYLVLNSGTPVIIGHHYPPHKSLLTDKAALLAFRKCIIHDPTSTLANWIEAIDVCNFTGVACDRHRHRVSKLSLIDVGLVGKIPPFLSNLTGLRILDIVNSYLFGEIPSELFSLRNLHRLRLDSNSLEGPIPTSLASLSRLTVISLRENRLNGTVPPSLFSNCTSLLNVDLSNNFLTGRIPEEIGNCPKLWNLNLYNNQFSGDLPLSLRNTSLYNLDVEYNHLSGELPAVLVENLPSLSFLHLSNNDMVSHDGNTNLEPFITSLRNCSSLEELELAGMGLGGRLPSSIGHLGVNFSVLSLQENQIFGSIPPNLAKLSNLAGLNLTSNLLNGTIPAEISRLSKLEQLFLSHNLFTSDIPEALGELPHLGLLDLSHNQLSGEIPESIGNLTQMIYLFLNHNLLSGTIPLALVKCTGLQKLDLSFNMLSGSIPREILGLQEIRIFINLSHNNFQGNLPIELSKLKNVQEMDLSSNNLTGSIFPQISSCIALRLLNFSNNSLQGHLPDSLGELENLESFDISKNQLSGMIPASLGKLQSLTYLNLSFNNFQGMIPREGFFKSSTPLSFLNNPLICGTIPGMPACSGKRNRFQSPVFLTIFILIICISSFLSTICCGIACQRLKAIVSARNSESSRRSKMPDFMHNFPRITSRQLSEATGGFDERRLIGSGSYGQVYKGVLPDGTTVAVKVLHTQSGNSTKSFNRECEVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLDNHLYRRSPTSSASGSSDLNLIERVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLKDDMTALVSDFGISRLMTPGIGSATVENMGKSTANMLTGSIGYIAPEYGFGSTASMKGDVYSFGVLVLEMVTRKRPIDDMFVEGLSLHKWVKSHYYGRVEKVVDYSLQRASRDESPEMKKMWEVAIRELIELGLLCTQESPSTRPTMLDAADDLDRLKRYLNGGDTTTTFASSLGISSSTLGDDSNYSPQIAVDRNI | 1755 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28053768 | 28071234 | + | CrPI670011_10g014350.1 | Cre10g1435 | 510737 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1435 | 1755 | MobiDBLite | consensus disorder prediction | 404 | 435 | - | - | |
Cre10g1435 | 1755 | Gene3D | Ribonuclease Inhibitor | 787 | 899 | IPR032675 | - | |
Cre10g1435 | 1755 | Gene3D | Ribonuclease Inhibitor | 900 | 975 | IPR032675 | - | |
Cre10g1435 | 1755 | FunFam | serine/threonine-protein kinase BLUS1 isoform X1 | 94 | 327 | - | - | |
Cre10g1435 | 1755 | MobiDBLite | consensus disorder prediction | 444 | 474 | - | - | |
Cre10g1435 | 1755 | SUPERFAMILY | L domain-like | 1077 | 1334 | - | - | |
Cre10g1435 | 1755 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1546 | 1558 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1435 | 1755 | Coils | Coil | 656 | 676 | - | - | |
Cre10g1435 | 1755 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 89 | - | - | |
Cre10g1435 | 1755 | Gene3D | Ribonuclease Inhibitor | 976 | 1350 | IPR032675 | - | |
Cre10g1435 | 1755 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 1400 | 1494 | - | - | |
Cre10g1435 | 1755 | CDD | STKc_IRAK | 1425 | 1715 | - | - | |
Cre10g1435 | 1755 | ProSiteProfiles | Protein kinase domain profile. | 1419 | 1719 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1435 | 1755 | FunFam | Serine/threonine-protein kinase BLUS1 | 2 | 90 | - | - | |
Cre10g1435 | 1755 | MobiDBLite | consensus disorder prediction | 377 | 491 | - | - | |
Cre10g1435 | 1755 | Pfam | Protein kinase domain | 15 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1435 | 1755 | Pfam | Protein kinase domain | 1421 | 1708 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1435 | 1755 | Gene3D | Phosphorylase Kinase; domain 1 | 1380 | 1494 | - | - | |
Cre10g1435 | 1755 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 1026 | 1344 | - | - | |
Cre10g1435 | 1755 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 275 | IPR011009 | - | |
Cre10g1435 | 1755 | SUPERFAMILY | Protein kinase-like (PK-like) | 1394 | 1712 | IPR011009 | - | |
Cre10g1435 | 1755 | PANTHER | OS04G0122200 PROTEIN | 806 | 913 | IPR051809 | - | |
Cre10g1435 | 1755 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1495 | 1726 | - | - | |
Cre10g1435 | 1755 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1425 | 1447 | IPR017441 | GO:0005524(InterPro) | |
Cre10g1435 | 1755 | MobiDBLite | consensus disorder prediction | 505 | 530 | - | - | |
Cre10g1435 | 1755 | ProSiteProfiles | Protein kinase domain profile. | 13 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1435 | 1755 | SUPERFAMILY | L domain-like | 787 | 1011 | - | - | |
Cre10g1435 | 1755 | SMART | serkin_6 | 1419 | 1719 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1435 | 1755 | SMART | serkin_6 | 13 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1435 | 1755 | Pfam | Leucine Rich Repeat | 1225 | 1247 | IPR001611 | GO:0005515(InterPro) | |
Cre10g1435 | 1755 | Pfam | Leucine Rich Repeat | 1177 | 1197 | IPR001611 | GO:0005515(InterPro) | |
Cre10g1435 | 1755 | Pfam | Leucine rich repeat | 1250 | 1308 | IPR001611 | GO:0005515(InterPro) | |
Cre10g1435 | 1755 | Pfam | Leucine rich repeat | 1080 | 1139 | IPR001611 | GO:0005515(InterPro) | |
Cre10g1435 | 1755 | Pfam | Leucine rich repeat | 902 | 962 | IPR001611 | GO:0005515(InterPro) | |
Cre10g1435 | 1755 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 825 | 1018 | - | - | |
Cre10g1435 | 1755 | Pfam | Leucine rich repeat N-terminal domain | 787 | 825 | IPR013210 | - | |
Cre10g1435 | 1755 | SMART | LRR_typ_2 | 1295 | 1319 | IPR003591 | - | |
Cre10g1435 | 1755 | SMART | LRR_typ_2 | 1174 | 1198 | IPR003591 | - | |
Cre10g1435 | 1755 | SMART | LRR_typ_2 | 1223 | 1247 | IPR003591 | - | |
Cre10g1435 | 1755 | SMART | LRR_typ_2 | 1126 | 1150 | IPR003591 | - | |
Cre10g1435 | 1755 | SMART | LRR_typ_2 | 1271 | 1294 | IPR003591 | - | |
Cre10g1435 | 1755 | SMART | LRR_typ_2 | 1102 | 1125 | IPR003591 | - | |
Cre10g1435 | 1755 | SMART | LRR_typ_2 | 900 | 924 | IPR003591 | - | |
Cre10g1435 | 1755 | ProSitePatterns | Protein kinases ATP-binding region signature. | 19 | 42 | IPR017441 | GO:0005524(InterPro) | |
Cre10g1435 | 1755 | CDD | STKc_OSR1_SPAK | 11 | 274 | - | - | |
Cre10g1435 | 1755 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 1495 | 1725 | - | - | |
Cre10g1435 | 1755 | Gene3D | Transferase(Phosphotransferase) domain 1 | 94 | 326 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0552 | Cre-Chr1:4811021 | Cre10g1435 | Cre-Chr10:28053768 | 2.60E-159 | dispersed | |
Cre06g2126 | Cre-Chr6:29046073 | Cre10g1435 | Cre-Chr10:28053768 | 1.80E-112 | dispersed | |
Cre06g2127 | Cre-Chr6:29063782 | Cre10g1435 | Cre-Chr10:28053768 | 1.50E-109 | dispersed | |
Cre10g0347 | Cre-Chr10:2282783 | Cre10g1435 | Cre-Chr10:28053768 | 2.80E-142 | dispersed | |
Cre10g1435 | Cre-Chr10:28053768 | Cre10g2304 | Cre-Chr10:37296883 | 7.90E-66 | dispersed | |
Cre10g1435 | Cre-Chr10:28053768 | Cre05g0552 | Cre-Chr5:4904613 | 1.50E-85 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64470 | PF00069 | Pkinase | 7.30E-42 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1435 | - | - | - | 0.0 |