Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1435 ATGGAGAAGAAGACTTATCCGATTGGTGAAGATTATTATATTCTGTATGAGGAGGTCGGGCAGGGTGTGAGCGCTTCAGTTCACCGTGCTCTTTGTAAACCTCTTAACGAGATCGTCGCCATTAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCGAATGTCCTTAAATCACACTGTTCTTTTGTCAATGGCCATGATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAAGTGGTCATAGCAACAGTATTGCGAGAAGTATTGAAGGGGGTTGAATATCTTCATAATCATGGACATATACATCGGGATATCAAAGCAGGGAATATTCTTATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCTGCTTGTCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTCGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAACGCACCTCCAGGGCTTGATTATGAGAGGGATAAAAAATTCTCAAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGGCCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAGGCAAGCCCGATCAAATGATTACATTGCACGCACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTCAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTATCTCAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAGTCAATAAGTGAAATCAGTGAAGTAGGGAGCTCAAATTCCTTATGTGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATAATGAAGAGAATGGCATGCTGCGGAGACAACCCTCCATGAAAGCAAATGACACAGTAGAGGGTAAAAAATCTATCAATGAATCAACAATTATTGGTTCTTCCTCTCAACATTATTCTTCACCCATTGAGAATGGCTCCAGTGAGGAGTTTCATTTGGAGAGCAGCAAAAGAATTTTGGGGAATACTCCGAATTCTAGCCAACATAAAAGAAGTATTTCTTCTAATACCGCTATTCAACAAGAAATCAGTTCACCACTGAACAGAAGAGAGAGTTATGAGACAGAAAAGAATGGTGCAAATGGCAGTCTTGCAATTGGAATGACTTCTCAGGCGGTAGATGATGTACTTTCTGATTCTCATTTTAAAGATCCCAAGTCATCATTAAGTCCAGCAACAAATGACGAGGAACAGGATGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACCTCGGAGAGTGTTGATGTAGAAAAGGCAGCTGCATCCCCTATTTTGCAAAAAAGTCACAGTATGCAGGTTGGTAATTCTGAGGTGATTACCTCAAATTCTGCTACTCCTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACCTTCATCTGATGCTATACCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAATCGCAATCGGAGAATTTTCAGCTGATGGCGTAGTTGATGTCTCAGCGGCCCATATAACAGCAACGGAAAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGAGTTACAGTGGAGGTTGAAGAAGATGGAACCTGAGGAAATATGGAAATGGGATCTGGGAGAAAGAAGGAGGCCGCCACCCACCGAATCAATCTACTCCAAATTTGCATTTCAGTCCCTTCATTCTGATAAAATTTGTTCTAGGAAGAAGAAATGTAAGGCAGTAAAGGATGATATGATGAGAGAAGAAGGTAACCTTACAGGTCCTTTCCACTGTAGTATTGTTCTTCGGCTTGATATGGTTTTCTTCAAAGCTGTGTTCCTTCTCCTGTTTCAGTATCTGGTTTTGAATTCTGGGACTCCAGTTATTATAGGTCACCACTACCCTCCTCATAAGTCCTTGCTCACTGATAAAGCAGCCCTCCTTGCCTTCAGGAAGTGCATCATACACGACCCCACTTCCACTCTAGCTAACTGGATTGAGGCTATTGATGTATGCAACTTCACTGGTGTTGCTTGTGACCGACACCGTCATCGGGTATCAAAGCTCAGCTTGATTGATGTTGGACTTGTGGGAAAGATTCCACCCTTCCTCTCCAATCTCACGGGTCTTCGAATTCTGGATATTGTTAACAGTTATCTTTTTGGGGAAATTCCTTCTGAACTTTTTTCTCTTCGAAATCTTCACCGCCTTCGCCTCGACAGCAACAGTTTGGAAGGTCCCATACCAACTTCCCTTGCTAGTTTGTCCAGGCTTACTGTAATAAGTCTTAGGGAGAACAGGCTAAATGGCACAGTTCCACCTTCTCTTTTTTCTAATTGCACGTCGTTGCTTAATGTAGACCTTTCCAACAACTTCTTAACAGGAAGAATTCCAGAAGAAATTGGAAATTGTCCAAAGCTGTGGAATCTCAATCTGTACAACAACCAGTTCAGTGGAGATCTTCCTCTTTCTTTAAGAAACACTTCGCTCTATAACTTGGATGTCGAATATAATCATCTTTCTGGCGAACTGCCTGCAGTGCTTGTAGAAAACCTGCCTTCACTTAGCTTCCTTCATTTATCAAATAATGATATGGTAAGCCACGATGGAAATACCAATCTTGAACCGTTCATTACTTCTCTTAGAAACTGCAGTAGTTTAGAGGAGCTTGAATTGGCTGGGATGGGGCTTGGAGGGAGGCTGCCCAGTTCTATTGGTCATCTGGGTGTCAATTTTTCAGTTCTGTCTTTGCAGGAAAACCAGATATTTGGATCAATTCCTCCAAATTTAGCCAAGCTTTCCAACCTTGCAGGGCTGAATTTGACATCAAATCTACTAAACGGAACAATTCCTGCAGAGATAAGCAGGTTGTCAAAATTGGAGCAGCTTTTCTTATCACACAACCTCTTCACTTCAGACATTCCAGAAGCATTAGGCGAGTTGCCACATCTTGGATTGTTGGATCTATCTCACAACCAACTTTCAGGAGAAATCCCAGAAAGTATTGGAAATTTAACTCAGATGATTTATTTGTTTCTCAACCACAACCTCTTGTCTGGAACAATACCTTTAGCGTTGGTAAAGTGCACAGGTCTACAAAAGCTGGACTTATCTTTCAACATGTTATCTGGAAGTATTCCTCGAGAGATCTTAGGCTTGCAAGAGATAAGAATTTTTATCAACCTTTCTCACAACAATTTTCAAGGAAACTTGCCCATTGAGCTTAGCAAGCTGAAAAATGTTCAAGAGATGGACCTTTCATCCAATAACCTCACTGGAAGCATCTTCCCTCAGATATCAAGTTGCATTGCACTGAGGTTACTAAATTTTTCAAATAATTCCCTCCAAGGTCATCTTCCAGATTCCCTAGGTGAACTCGAGAACCTTGAATCATTTGACATTTCAAAAAACCAATTGTCAGGCATGATTCCAGCCAGTCTAGGTAAGCTCCAATCTCTCACTTACCTGAATCTTTCATTCAATAACTTCCAAGGAATGATTCCAAGAGAGGGATTTTTCAAATCCTCCACACCTCTGTCATTTTTGAACAATCCACTAATTTGTGGGACAATTCCTGGAATGCCAGCCTGTTCTGGCAAGAGAAATCGGTTTCAATCACCTGTATTCTTGACTATATTCATTTTAATCATATGCATATCATCTTTCTTATCAACAATATGCTGTGGGATTGCTTGTCAACGTCTAAAAGCAATTGTTTCAGCACGAAATAGTGAGTCATCAAGGAGATCAAAGATGCCAGATTTTATGCACAATTTTCCAAGAATAACAAGCAGGCAACTATCAGAGGCCACTGGAGGTTTTGATGAACGGAGACTAATTGGTTCAGGCAGCTATGGACAAGTCTATAAAGGCGTTCTTCCAGATGGAACAACTGTAGCTGTTAAGGTTTTGCATACACAATCTGGAAACTCCACAAAGAGTTTTAACAGAGAATGCGAAGTTTTGAAGCGAATTCGCCACAGAAACCTTATAAGAATTATAACAGCTTGTAGTCTTCCGGATTTTAAAGCTCTAGTTCTACCATATATGGCAAATGGAAGCTTGGATAACCATCTATATCGACGTTCACCTACCAGCTCGGCTTCGGGTTCTTCAGATTTAAACCTTATTGAGAGGGTGAATATATGCAGTGATATAGCTGAAGGAATGGCATACCTGCATCATCATTCTCCAGTCAGAGTCATACACTGTGATTTAAAGCCAAGTAATGTACTTCTAAAGGATGACATGACAGCCCTTGTTTCTGACTTCGGGATCTCAAGGCTAATGACCCCTGGAATTGGAAGCGCAACTGTTGAAAACATGGGAAAGTCAACTGCAAACATGTTAACTGGATCAATTGGATATATTGCACCAGAGTACGGATTTGGTTCTACAGCCTCCATGAAAGGAGACGTTTACAGCTTCGGCGTGCTAGTTCTAGAGATGGTAACAAGAAAAAGGCCAATAGACGACATGTTTGTTGAAGGGCTAAGTTTACATAAGTGGGTGAAGAGTCATTACTACGGCAGAGTAGAAAAAGTAGTGGATTATTCTCTACAGAGAGCTTCGAGAGATGAATCACCTGAAATGAAGAAAATGTGGGAAGTGGCAATCCGAGAGCTAATCGAATTAGGTTTGCTCTGCACTCAAGAATCTCCATCCACAAGACCAACAATGCTGGATGCTGCTGATGACTTGGATCGATTGAAGAGATACCTTAATGGTGGCGACACCACAACAACATTTGCTTCATCACTTGGAATTTCGTCCTCCACTCTTGGCGATGACTCCAATTACTCCCCACAAATCGCCGTTGACAGAAACATCTAG 5268 41.21 MEKKTYPIGEDYYILYEEVGQGVSASVHRALCKPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHDLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFRQARSNDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEISEVGSSNSLCALDVQEKKLQGQNSSEISDNEENGMLRRQPSMKANDTVEGKKSINESTIIGSSSQHYSSPIENGSSEEFHLESSKRILGNTPNSSQHKRSISSNTAIQQEISSPLNRRESYETEKNGANGSLAIGMTSQAVDDVLSDSHFKDPKSSLSPATNDEEQDEKAKAPVIQQKGRFKVTSESVDVEKAAASPILQKSHSMQVGNSEVITSNSATPLPSNLPTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMRQIAIGEFSADGVVDVSAAHITATEKSLLEAAHEREKDLLNEVTELQWRLKKMEPEEIWKWDLGERRRPPPTESIYSKFAFQSLHSDKICSRKKKCKAVKDDMMREEGNLTGPFHCSIVLRLDMVFFKAVFLLLFQYLVLNSGTPVIIGHHYPPHKSLLTDKAALLAFRKCIIHDPTSTLANWIEAIDVCNFTGVACDRHRHRVSKLSLIDVGLVGKIPPFLSNLTGLRILDIVNSYLFGEIPSELFSLRNLHRLRLDSNSLEGPIPTSLASLSRLTVISLRENRLNGTVPPSLFSNCTSLLNVDLSNNFLTGRIPEEIGNCPKLWNLNLYNNQFSGDLPLSLRNTSLYNLDVEYNHLSGELPAVLVENLPSLSFLHLSNNDMVSHDGNTNLEPFITSLRNCSSLEELELAGMGLGGRLPSSIGHLGVNFSVLSLQENQIFGSIPPNLAKLSNLAGLNLTSNLLNGTIPAEISRLSKLEQLFLSHNLFTSDIPEALGELPHLGLLDLSHNQLSGEIPESIGNLTQMIYLFLNHNLLSGTIPLALVKCTGLQKLDLSFNMLSGSIPREILGLQEIRIFINLSHNNFQGNLPIELSKLKNVQEMDLSSNNLTGSIFPQISSCIALRLLNFSNNSLQGHLPDSLGELENLESFDISKNQLSGMIPASLGKLQSLTYLNLSFNNFQGMIPREGFFKSSTPLSFLNNPLICGTIPGMPACSGKRNRFQSPVFLTIFILIICISSFLSTICCGIACQRLKAIVSARNSESSRRSKMPDFMHNFPRITSRQLSEATGGFDERRLIGSGSYGQVYKGVLPDGTTVAVKVLHTQSGNSTKSFNRECEVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLDNHLYRRSPTSSASGSSDLNLIERVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLKDDMTALVSDFGISRLMTPGIGSATVENMGKSTANMLTGSIGYIAPEYGFGSTASMKGDVYSFGVLVLEMVTRKRPIDDMFVEGLSLHKWVKSHYYGRVEKVVDYSLQRASRDESPEMKKMWEVAIRELIELGLLCTQESPSTRPTMLDAADDLDRLKRYLNGGDTTTTFASSLGISSSTLGDDSNYSPQIAVDRNI 1755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28053768 28071234 + CrPI670011_10g014350.1 Cre10g1435 510737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1435 1755 MobiDBLite consensus disorder prediction 404 435 - -
Cre10g1435 1755 Gene3D Ribonuclease Inhibitor 787 899 IPR032675 -
Cre10g1435 1755 Gene3D Ribonuclease Inhibitor 900 975 IPR032675 -
Cre10g1435 1755 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Cre10g1435 1755 MobiDBLite consensus disorder prediction 444 474 - -
Cre10g1435 1755 SUPERFAMILY L domain-like 1077 1334 - -
Cre10g1435 1755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1546 1558 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1435 1755 Coils Coil 656 676 - -
Cre10g1435 1755 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Cre10g1435 1755 Gene3D Ribonuclease Inhibitor 976 1350 IPR032675 -
Cre10g1435 1755 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1400 1494 - -
Cre10g1435 1755 CDD STKc_IRAK 1425 1715 - -
Cre10g1435 1755 ProSiteProfiles Protein kinase domain profile. 1419 1719 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1435 1755 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Cre10g1435 1755 MobiDBLite consensus disorder prediction 377 491 - -
Cre10g1435 1755 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1435 1755 Pfam Protein kinase domain 1421 1708 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1435 1755 Gene3D Phosphorylase Kinase; domain 1 1380 1494 - -
Cre10g1435 1755 FunFam Leucine-rich repeat receptor-like protein kinase TDR 1026 1344 - -
Cre10g1435 1755 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Cre10g1435 1755 SUPERFAMILY Protein kinase-like (PK-like) 1394 1712 IPR011009 -
Cre10g1435 1755 PANTHER OS04G0122200 PROTEIN 806 913 IPR051809 -
Cre10g1435 1755 Gene3D Transferase(Phosphotransferase) domain 1 1495 1726 - -
Cre10g1435 1755 ProSitePatterns Protein kinases ATP-binding region signature. 1425 1447 IPR017441 GO:0005524(InterPro)
Cre10g1435 1755 MobiDBLite consensus disorder prediction 505 530 - -
Cre10g1435 1755 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1435 1755 SUPERFAMILY L domain-like 787 1011 - -
Cre10g1435 1755 SMART serkin_6 1419 1719 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1435 1755 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1435 1755 Pfam Leucine Rich Repeat 1225 1247 IPR001611 GO:0005515(InterPro)
Cre10g1435 1755 Pfam Leucine Rich Repeat 1177 1197 IPR001611 GO:0005515(InterPro)
Cre10g1435 1755 Pfam Leucine rich repeat 1250 1308 IPR001611 GO:0005515(InterPro)
Cre10g1435 1755 Pfam Leucine rich repeat 1080 1139 IPR001611 GO:0005515(InterPro)
Cre10g1435 1755 Pfam Leucine rich repeat 902 962 IPR001611 GO:0005515(InterPro)
Cre10g1435 1755 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 825 1018 - -
Cre10g1435 1755 Pfam Leucine rich repeat N-terminal domain 787 825 IPR013210 -
Cre10g1435 1755 SMART LRR_typ_2 1295 1319 IPR003591 -
Cre10g1435 1755 SMART LRR_typ_2 1174 1198 IPR003591 -
Cre10g1435 1755 SMART LRR_typ_2 1223 1247 IPR003591 -
Cre10g1435 1755 SMART LRR_typ_2 1126 1150 IPR003591 -
Cre10g1435 1755 SMART LRR_typ_2 1271 1294 IPR003591 -
Cre10g1435 1755 SMART LRR_typ_2 1102 1125 IPR003591 -
Cre10g1435 1755 SMART LRR_typ_2 900 924 IPR003591 -
Cre10g1435 1755 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Cre10g1435 1755 CDD STKc_OSR1_SPAK 11 274 - -
Cre10g1435 1755 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1495 1725 - -
Cre10g1435 1755 Gene3D Transferase(Phosphotransferase) domain 1 94 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0552 Cre-Chr1:4811021 Cre10g1435 Cre-Chr10:28053768 2.60E-159 dispersed
Cre06g2126 Cre-Chr6:29046073 Cre10g1435 Cre-Chr10:28053768 1.80E-112 dispersed
Cre06g2127 Cre-Chr6:29063782 Cre10g1435 Cre-Chr10:28053768 1.50E-109 dispersed
Cre10g0347 Cre-Chr10:2282783 Cre10g1435 Cre-Chr10:28053768 2.80E-142 dispersed
Cre10g1435 Cre-Chr10:28053768 Cre10g2304 Cre-Chr10:37296883 7.90E-66 dispersed
Cre10g1435 Cre-Chr10:28053768 Cre05g0552 Cre-Chr5:4904613 1.50E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64470 PF00069 Pkinase 7.30E-42 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1435 - - - 0.0