Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1447 ATGCCGATCGATACCTCTGCAGTTTCCGGCCAAATTGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTTAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAACAACTTAGAAGGAGCTAAAGAGCGGTTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGACAGTCTCAAAGCAGCTATTATGGGTTGCCATGGTGTTTTCCACACCGCGTCTCCGGTGACCGATGATCCTGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAATGTCATGACCGCAGCTGCTGAAGCAAATGTTCGACGAGTGGTGTTCACGTCGTCGATCGGCTCGGTCTACATGAACCCTAACCGAAGCCCCGACGTGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAAAGAAGTGGATCTTGTTGTGGTGAATCCAATGTTGGTTTTGGGGCCTTTGTTGCAAGAAGGTGTGAATGCAAGTGTAGTTCATATAATGAAATATTTGACAGGATCAGCAAAGACATATGTAAACGCAGTTCAAGGATATGTTGATGTTAAGGATGTTGCAAAAGCACATGTTTTGGTTTATGAAACTCCTTCAACTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTAGAAACTTCTTCCCTCAATATCCTCTTCCTACCAAGTAA 828 43.96 MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLNNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGSVYMNPNRSPDVVVDESCWSDLEFCKNTKNWYCYAKTVAEQAAWEVAKEKEVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSTSGRYICVESMLHRGELVDILRNFFPQYPLPTK 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28280608 28281838 - CrPI670011_10g014470.1 Cre10g1447 510749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1447 275 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Cre10g1447 275 FunFam Cinnamoyl-CoA reductase 1 6 275 - -
Cre10g1447 275 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 268 IPR050425 GO:0016616(PANTHER)
Cre10g1447 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 273 IPR036291 -
Cre10g1447 275 CDD FR_SDR_e 13 275 - -
Cre10g1447 275 Gene3D - 3 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g1447 Cre-Chr10:28280608 Cre10g1449 Cre-Chr10:28312177 8.90E-134 dispersed
Cre10g1447 Cre-Chr10:28280608 Cre10g1448 Cre-Chr10:28289633 2.30E-153 tandem
Cre10g1447 Cre-Chr10:28280608 Cre09g0311 Cre-Chr9:3032537 1.10E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1447 K09753 - csv:116401668 515.383