Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1447 | ATGCCGATCGATACCTCTGCAGTTTCCGGCCAAATTGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTTAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAACAACTTAGAAGGAGCTAAAGAGCGGTTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGACAGTCTCAAAGCAGCTATTATGGGTTGCCATGGTGTTTTCCACACCGCGTCTCCGGTGACCGATGATCCTGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAATGTCATGACCGCAGCTGCTGAAGCAAATGTTCGACGAGTGGTGTTCACGTCGTCGATCGGCTCGGTCTACATGAACCCTAACCGAAGCCCCGACGTGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAAAGAAGTGGATCTTGTTGTGGTGAATCCAATGTTGGTTTTGGGGCCTTTGTTGCAAGAAGGTGTGAATGCAAGTGTAGTTCATATAATGAAATATTTGACAGGATCAGCAAAGACATATGTAAACGCAGTTCAAGGATATGTTGATGTTAAGGATGTTGCAAAAGCACATGTTTTGGTTTATGAAACTCCTTCAACTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTAGAAACTTCTTCCCTCAATATCCTCTTCCTACCAAGTAA | 828 | 43.96 | MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLNNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGSVYMNPNRSPDVVVDESCWSDLEFCKNTKNWYCYAKTVAEQAAWEVAKEKEVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSTSGRYICVESMLHRGELVDILRNFFPQYPLPTK | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28280608 | 28281838 | - | CrPI670011_10g014470.1 | Cre10g1447 | 510749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1447 | 275 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 243 | IPR001509 | - | |
Cre10g1447 | 275 | FunFam | Cinnamoyl-CoA reductase 1 | 6 | 275 | - | - | |
Cre10g1447 | 275 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 12 | 268 | IPR050425 | GO:0016616(PANTHER) | |
Cre10g1447 | 275 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 6 | 273 | IPR036291 | - | |
Cre10g1447 | 275 | CDD | FR_SDR_e | 13 | 275 | - | - | |
Cre10g1447 | 275 | Gene3D | - | 3 | 275 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre10g1447 | Cre-Chr10:28280608 | Cre10g1449 | Cre-Chr10:28312177 | 8.90E-134 | dispersed | |
Cre10g1447 | Cre-Chr10:28280608 | Cre10g1448 | Cre-Chr10:28289633 | 2.30E-153 | tandem | |
Cre10g1447 | Cre-Chr10:28280608 | Cre09g0311 | Cre-Chr9:3032537 | 1.10E-123 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1447 | K09753 | - | csv:116401668 | 515.383 |