Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1448 ATGCCGATTGATACCTCTGCAGTCTCCGGCCAAATTGTGTGTGTCACCGGCGCCGGCGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTCAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAACAACTTAGAAGGAGCTAAAGAGAGATTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGACAGCCTCAAAGCAGCCATTATGGGTTGTCATGGTGTTTTCCACACTGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAACGTCATGACCGCTGCCGCTGAAGCAAACGTCCGACGAGTGGTGTTCACGTCATCGATCGGCACCGTCTATATGAACCCTAACCGAAGCCCGGACGCGGTAGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGTTATGCCAAGACAATGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAAGGGAGTGGATCTTGTGGTGGTAAATCCAATGTTGGTATTGGGGCCTTTGTTGCAAGAAGGTGTGAATGCAAGTGTGATTCATATAATGAAATATTTAACAGGATCAGCAAAAACATATGTAAATGCAGTTCAAGGTTATGTTGATGTTAAGGATGTTGCAAAAGCCCATATTTTGGTTTATGAAACTCCTTCAGCTTCAGGAAGATATATTTGTGTTGAAAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTAAAAACTTCTTCCCTCAATATCCTCTTCCTCCCAAGTGTTCTGATGAGATAAATCCCAGAAAGAAACCTTACAAGTACACAGTGGAGAAGCTAAAGACATTAGGAATGGAATTCACACCAATCAAGCAATGCATATATGAAACTGTAAAGAGCCTACAAGACAAGGGTCATCTTCCACTTCCTTCCCAACTTCAACATTGA 990 43.43 MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLNNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGTVYMNPNRSPDAVVDESCWSDLEFCKNTKNWYCYAKTMAEQAAWEVAKEKGVDLVVVNPMLVLGPLLQEGVNASVIHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHILVYETPSASGRYICVESMLHRGELVDILKNFFPQYPLPPKCSDEINPRKKPYKYTVEKLKTLGMEFTPIKQCIYETVKSLQDKGHLPLPSQLQH 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28289633 28303270 - CrPI670011_10g014480.1 Cre10g1448 510750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1448 329 Gene3D - 3 329 - -
Cre10g1448 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 315 IPR036291 -
Cre10g1448 329 CDD FR_SDR_e 13 298 - -
Cre10g1448 329 FunFam Cinnamoyl-CoA reductase 1 4 329 - -
Cre10g1448 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
Cre10g1448 329 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0311 Cre-Chr9:3032537 Cre10g1448 Cre-Chr10:28289633 4.60E-148 dispersed
Cre10g0943 Cre-Chr10:12599316 Cre10g1448 Cre-Chr10:28289633 2.00E-63 dispersed
Cre10g1448 Cre-Chr10:28289633 Cre11g2299 Cre-Chr11:34606621 2.10E-73 dispersed
Cre10g1447 Cre-Chr10:28280608 Cre10g1448 Cre-Chr10:28289633 2.30E-153 tandem
Cre10g1448 Cre-Chr10:28289633 Cre10g1449 Cre-Chr10:28312177 5.60E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1448 K09753 - csv:116401668 623.239