Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1449 | ATGCCCCTCGCCGCCGCCGTAGCTTCCGGTCAAATTGTTTGTGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGCTTGTGAAGCTTCTTCTTCAAAAGGGTTACACTGTTAGAGGCACTGTAAGAAACCCAGATGATCGGAAGAATGATCATTTGAAAGAGTTAGATGGAGCTGAGGAAAGGTTGACGCTGTACGGTGCTGATCTACTTGATTTCGACAGCCTTAAAGCCGCCATTATCGGTTGCGATGGTGTTTTCCACACGGCGTCTCCGGTGACTGACGACCCCGAAAAGGTGGAGCAGGCAATAATTGGGACGAAAAATGTTATAATGGCGGCGGCGGAGGCCAAGGTCCGGCGAGTGGTGTTCACATCGTCCATTGGAACTATACACATGAACCCTAATCGGAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAAAATACAAAGAACTGGTATTGTTATGCAAAAACAGTGGCAGAGCAAACAGCATGGGCAATGGCAGAGGAGAAAGGGGTGGATTTAGTAGTGGTGAATCCAATGTTGGTGCTTGGACCATTATTACAACAAACAATCAATGCAAGTGTAGCTCATATAATGAAGTACTTGACTGGCTCAGTCAAGACATACGTCAATGCAGTTCAAGGATACGTTCATGTTAAGGATGTTGCAAAAGCTCACTTGTTGGTGTATGAGACTCCCTCTGCATTTGGTAGATATATTTGTGTTGAAACTATGCTTCATCGTGGAGAATTGGTTGAAATTTTGGCTAAATTCTTTCCTGAGTATCCCATTCCTACCAAGTGCTCTGACCAGGTGAACCCTAAGAAGAAACCTTACAAATTTAGTGTAAAAAAGCTGAAGGACTTGGGGATGGATCAGTTCATACCTGTGAAGCAATGCATATATGAAACTGTGAAGAGCCTTCAAGAGAAGGGTCATCTTCCACTTCCTTAA | 978 | 45.6 | MPLAAAVASGQIVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNPDDRKNDHLKELDGAEERLTLYGADLLDFDSLKAAIIGCDGVFHTASPVTDDPEKVEQAIIGTKNVIMAAAEAKVRRVVFTSSIGTIHMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTVAEQTAWAMAEEKGVDLVVVNPMLVLGPLLQQTINASVAHIMKYLTGSVKTYVNAVQGYVHVKDVAKAHLLVYETPSAFGRYICVETMLHRGELVEILAKFFPEYPIPTKCSDQVNPKKKPYKFSVKKLKDLGMDQFIPVKQCIYETVKSLQEKGHLPLP | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28312177 | 28319169 | - | CrPI670011_10g014490.1 | Cre10g1449 | 510751 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1449 | 325 | Gene3D | - | 4 | 325 | - | - | |
Cre10g1449 | 325 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 9 | 317 | IPR036291 | - | |
Cre10g1449 | 325 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 12 | 314 | IPR050425 | GO:0016616(PANTHER) | |
Cre10g1449 | 325 | CDD | FR_SDR_e | 13 | 298 | - | - | |
Cre10g1449 | 325 | FunFam | Cinnamoyl-CoA reductase 1 | 4 | 325 | - | - | |
Cre10g1449 | 325 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 243 | IPR001509 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g2449 | Cre-Chr5:35891688 | Cre10g1449 | Cre-Chr10:28312177 | 3.90E-62 | dispersed | |
Cre06g0817 | Cre-Chr6:1503065 | Cre10g1449 | Cre-Chr10:28312177 | 3.30E-50 | dispersed | |
Cre09g1388 | Cre-Chr9:23589065 | Cre10g1449 | Cre-Chr10:28312177 | 8.70E-29 | dispersed | |
Cre10g1447 | Cre-Chr10:28280608 | Cre10g1449 | Cre-Chr10:28312177 | 8.90E-134 | dispersed | |
Cre10g1449 | Cre-Chr10:28312177 | Cre11g2299 | Cre-Chr11:34606621 | 1.20E-68 | dispersed | |
Cre10g1448 | Cre-Chr10:28289633 | Cre10g1449 | Cre-Chr10:28312177 | 5.60E-159 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1449 | K09753 | - | csv:101219069 | 617.461 |