Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1449 ATGCCCCTCGCCGCCGCCGTAGCTTCCGGTCAAATTGTTTGTGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGCTTGTGAAGCTTCTTCTTCAAAAGGGTTACACTGTTAGAGGCACTGTAAGAAACCCAGATGATCGGAAGAATGATCATTTGAAAGAGTTAGATGGAGCTGAGGAAAGGTTGACGCTGTACGGTGCTGATCTACTTGATTTCGACAGCCTTAAAGCCGCCATTATCGGTTGCGATGGTGTTTTCCACACGGCGTCTCCGGTGACTGACGACCCCGAAAAGGTGGAGCAGGCAATAATTGGGACGAAAAATGTTATAATGGCGGCGGCGGAGGCCAAGGTCCGGCGAGTGGTGTTCACATCGTCCATTGGAACTATACACATGAACCCTAATCGGAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAAAATACAAAGAACTGGTATTGTTATGCAAAAACAGTGGCAGAGCAAACAGCATGGGCAATGGCAGAGGAGAAAGGGGTGGATTTAGTAGTGGTGAATCCAATGTTGGTGCTTGGACCATTATTACAACAAACAATCAATGCAAGTGTAGCTCATATAATGAAGTACTTGACTGGCTCAGTCAAGACATACGTCAATGCAGTTCAAGGATACGTTCATGTTAAGGATGTTGCAAAAGCTCACTTGTTGGTGTATGAGACTCCCTCTGCATTTGGTAGATATATTTGTGTTGAAACTATGCTTCATCGTGGAGAATTGGTTGAAATTTTGGCTAAATTCTTTCCTGAGTATCCCATTCCTACCAAGTGCTCTGACCAGGTGAACCCTAAGAAGAAACCTTACAAATTTAGTGTAAAAAAGCTGAAGGACTTGGGGATGGATCAGTTCATACCTGTGAAGCAATGCATATATGAAACTGTGAAGAGCCTTCAAGAGAAGGGTCATCTTCCACTTCCTTAA 978 45.6 MPLAAAVASGQIVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNPDDRKNDHLKELDGAEERLTLYGADLLDFDSLKAAIIGCDGVFHTASPVTDDPEKVEQAIIGTKNVIMAAAEAKVRRVVFTSSIGTIHMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTVAEQTAWAMAEEKGVDLVVVNPMLVLGPLLQQTINASVAHIMKYLTGSVKTYVNAVQGYVHVKDVAKAHLLVYETPSAFGRYICVETMLHRGELVEILAKFFPEYPIPTKCSDQVNPKKKPYKFSVKKLKDLGMDQFIPVKQCIYETVKSLQEKGHLPLP 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28312177 28319169 - CrPI670011_10g014490.1 Cre10g1449 510751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1449 325 Gene3D - 4 325 - -
Cre10g1449 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 317 IPR036291 -
Cre10g1449 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
Cre10g1449 325 CDD FR_SDR_e 13 298 - -
Cre10g1449 325 FunFam Cinnamoyl-CoA reductase 1 4 325 - -
Cre10g1449 325 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2449 Cre-Chr5:35891688 Cre10g1449 Cre-Chr10:28312177 3.90E-62 dispersed
Cre06g0817 Cre-Chr6:1503065 Cre10g1449 Cre-Chr10:28312177 3.30E-50 dispersed
Cre09g1388 Cre-Chr9:23589065 Cre10g1449 Cre-Chr10:28312177 8.70E-29 dispersed
Cre10g1447 Cre-Chr10:28280608 Cre10g1449 Cre-Chr10:28312177 8.90E-134 dispersed
Cre10g1449 Cre-Chr10:28312177 Cre11g2299 Cre-Chr11:34606621 1.20E-68 dispersed
Cre10g1448 Cre-Chr10:28289633 Cre10g1449 Cre-Chr10:28312177 5.60E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1449 K09753 - csv:101219069 617.461