Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1491 ATGGAGTTGGTAAGCGAGAAGAGGGATTTTGATTCTTCAAACGACAACAACAAGCTCAACTCTGCTCAACCACTTCTTGATTCTTCTTATCAACCCTCACCCGCTGATGACACAAATGCCAAAGAAGCTGAAGAGTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGGAGCTGTTAGCTCTTAGTTGGTTAGACAATTTGTTGGTTTATGAATTCAAATTTGGAAGAGTTTTGTCTCTGCATCACATGAACGGATTCTCCTATGAGTTCCTTGCATCATGGCATTTTGGGGTCATTTTCTCAGGTAAAGTTCGTGAAATTCCATGTGACCCCCTGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACGTCATATGAGGACAACATAAAAAAGATTGTGGACTTCAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCTTTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCGAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGACCAACTTGATTTTGGCGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTCTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCGCATGGGTATGTAATGGAATACAAACCCCATGATGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGAACCTTGGAAAGACATCTACACAAGACAACTTCTGTTTACATGTTAACTTAACATTGTTCAACTTTTTAGGACAAAACTTAGATCCATATTGCCAGCTGCTAGACCTAGGCTCAGATGTAGATGCTGGAATAGCGGAGCAGCTAAGTTCTGTCCATTGTAATAATGGACAAACACAGCTGGCTAATGTCAGCTTCTTTTGTCTTGGACAACTCACCATGAATCTTTCAACCCCCATCCCTTCTTCACTTTAA 1134 43.56 MELVSEKRDFDSSNDNNKLNSAQPLLDSSYQPSPADDTNAKEAEELSERVARDLKDGLHPLKELLALSWLDNLLVYEFKFGRVLSLHHMNGFSYEFLASWHFGVIFSGKVREIPCDPLHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRGNLGKTSTQDNFCLHVNLTLFNFLGQNLDPYCQLLDLGSDVDAGIAEQLSSVHCNNGQTQLANVSFFCLGQLTMNLSTPIPSSL 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28767465 28778884 + CrPI670011_10g014910.1 Cre10g1491 510793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1491 377 MobiDBLite consensus disorder prediction 15 36 - -
Cre10g1491 377 Pfam Eukaryotic initiation factor 4E 119 274 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cre10g1491 377 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 50 289 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cre10g1491 377 Gene3D RNA Cap, Translation Initiation Factor Eif4e 112 287 IPR023398 -
Cre10g1491 377 SUPERFAMILY eIF4e-like 119 290 IPR023398 -
Cre10g1491 377 MobiDBLite consensus disorder prediction 1 46 - -
Cre10g1491 377 ProSitePatterns Eukaryotic initiation factor 4E signature. 172 195 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1494 Cre-Chr6:9585295 Cre10g1491 Cre-Chr10:28767465 1.50E-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1491 K03259 - csv:101204290 423.32