Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1526 | ATGGCTTCTGGTAATGGGTTTTATCCCACTGATGAATTCAATTTGGATGCTAAATGGTTGATTGATCCTAAGCATCTTTTTGTTGGGCCAAAGATTGGGGAAGGTGCCCATGCCAAGGTGTATGAGGGAAAATACAAAAATCAGATTGTGGCTATCAAAATGGTGGGTAAAGGAGATACTCCTGAGAGGATGGCCAGAAGAGAATCTCGGTTTGCTAGAGAGGTTGCAATGTTGTCCAAAGTGCAACACAAGAACTTAGTGAAGTTTATTGGCGCTTGCAAGGAACCTATGATGGTTATAGTAACTGAATTACTCACAGGTGGCACATTGCGCAAACATCTCTTGAATTTGAGGCCAAGGAACTTGGAACTTGATGTGGCGATCGGGTTTGCGCTTGATATTGCTCGTGCCATGGAGTGTTTACACTCCCATGGAATTATTCACCGTGACCTTAAACCAGAAAACTTGATATTGACTGCAGACCGTAAAACAGTTAAGCTTGCTGATTTTGGTTTGGCAAGAGAAGAATCAGTAACAGAGATGATGACTGCAGAAACAGGAACATATAGGTGGATGGCTCCAGAGCTCTATAGCACAGTCACTTTAAAACATGGAGATAAGAAGCATTATAATCATAAAGTTGATGCCTACAGCTTTGCCATTGTATTGTGGGAGCTCATCCTTAACAGGCTGCCTTTCGAAGGCATGTCGAATTTACAGGCGGCATATGCAGCTGCTTTTAAGAACATGAGGCCCAGTGCTGAAAACCTTCCAGAGGACTTAGCTTTAATAGTGACATCATGTTGGAGAGAAGATCCAAATACAAGGCCAAACTTCAGCCAGATTATACAGATGCTATTGCAATCCCTCTCTAGAATATCACCACGAGCACCCATGATCCCACCTCGGATATGTGCTTCTGAAAACGTCGTGATGCCACCTGAATCTCCCGGCACAAATTCCTTGATGGCTGTCAGACATGGCTCGGGGGAAGCCACACACGGCATGATCGAAGAAACCCCAAAAAGCTCCTTCTTCTGCTTTAACAAGTGTTACTGA | 1059 | 43.91 | MASGNGFYPTDEFNLDAKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQIVAIKMVGKGDTPERMARRESRFAREVAMLSKVQHKNLVKFIGACKEPMMVIVTELLTGGTLRKHLLNLRPRNLELDVAIGFALDIARAMECLHSHGIIHRDLKPENLILTADRKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDAYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKNMRPSAENLPEDLALIVTSCWREDPNTRPNFSQIIQMLLQSLSRISPRAPMIPPRICASENVVMPPESPGTNSLMAVRHGSGEATHGMIEETPKSSFFCFNKCY | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 29191485 | 29194927 | - | CrPI670011_10g015260.1 | Cre10g1526 | 510828 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1526 | 352 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1526 | 352 | CDD | STKc_MAP3K-like | 32 | 286 | - | - | |
Cre10g1526 | 352 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 20 | 290 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cre10g1526 | 352 | ProSitePatterns | Protein kinases ATP-binding region signature. | 32 | 57 | IPR017441 | GO:0005524(InterPro) | |
Cre10g1526 | 352 | ProSiteProfiles | Protein kinase domain profile. | 26 | 290 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1526 | 352 | Gene3D | Transferase(Phosphotransferase) domain 1 | 108 | 298 | - | - | |
Cre10g1526 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 140 | 158 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1526 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 102 | 115 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1526 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 214 | 236 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1526 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 257 | 279 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1526 | 352 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 105 | - | - | |
Cre10g1526 | 352 | SMART | serkin_6 | 26 | 290 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1526 | 352 | Pfam | Protein tyrosine and serine/threonine kinase | 30 | 286 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1526 | 352 | FunFam | Kinase suppressor of Ras 1 | 15 | 105 | - | - | |
Cre10g1526 | 352 | SUPERFAMILY | Protein kinase-like (PK-like) | 18 | 309 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g1551 | Cre-Chr4:34121729 | Cre10g1526 | Cre-Chr10:29191485 | 1.80E-80 | dispersed | |
Cre10g1526 | Cre-Chr10:29191485 | Cre10g2370 | Cre-Chr10:37805218 | 4.10E-115 | dispersed | |
Cre01g0525 | Cre-Chr1:4536100 | Cre10g1526 | Cre-Chr10:29191485 | 3.00E-147 | wgd | |
Cre10g1526 | Cre-Chr10:29191485 | Cre06g2601 | Cre-Chr6:33704064 | 3.30E-157 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64475 | PF07714 | PK_Tyr_Ser-Thr | 1.10E-56 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1526 | - | - | - | 0.0 |