Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1529 ATGAAGATAAAGACTGCCATTTTGTACTTCAGAGACTGGGAAATAAACTACAAGGAACTCGCAAAGTTGCTTCACTTTTCTCTCTGTGCTTGCATTGTTGGTTTTGATATTGCTTTGATTGTGAATCAAGGTTCACTGCTTGAGTTTCGGGTCAGCCATCAACAGATCTGGCCTGAGAGTGTGTTTGAGCCGGAGCTGTTGATGGAGCCACTTGTTGATGGTATGAGTTCTTTACTGAAAACTCAGAACCCGACATCTACATCAAGGAATCTCGATTCATCTCGCCAGCCATCTCCTAAACAGTCTAGGAATGAAGCAACTTCTTCGGCGTCCTACCCTTGGTCTCAAAATTGTGCCAAGAAACCCCTTCGCCATCCAAATGGTTCTTCTGTAAGTAGTAAAAAACATCCTACCAATTTGAACGTGCAGCTTGAAGGTTTAACTGATGTGAAAAATCATACACACGTTTCTAATAAGGGGAAATCCGAGCTAGTAAACCCAACAGATAGTTCACATAAATCAACTGAAAGTTCTTTTCAGAAGAAGGTTCCTTTGGAGGGAGGTGAAGCAGAACCTCTTGTGAAGCATATTATCGATGATTCTAAGGATTGTTGTTCAAGTGGCTCAGAAGAATCTGGAAATCAAGTATTGAACGCATCGAAAGGAGCTGCCACGCAAATAATTGATCAACTAAAGTCTCAGCCAGCTGAAATATCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCAAACACAGAAGTCAGTGAATGTGCAAGCAGCATTGAAAAGTCTTGTGAAAGCATCGACATCACAAATTCCCTTGATCTTGACAAAAGCAGGAAAACAAGTGTTTACCGAGGCAGCACTGGCAGTGATATCAGTGATGAAAGCAATTCGAGTAGTTTAAGCAATGCCATGTATAAGCCTCATAAAGCAAATGATACAAGATGGGAAGCAATGCAAGTTGTGAGATCTCATGATGGGATGTTAGGACTTAACCATTTCCGGTTGCTGCGAAGACTGGGATGTGGTGATATTGGCAGTGTCTATCTTTCAGAGTTAACTGGTACCAAAACTTACTTTGCCATGAAGGTTATGGATAAGGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACTGAACGCGAGATACTGCAATCTCTGGATCATCCTTTCCTGCCAACTTTGTATACACACTTTGAGACAGAGAAGTTCTCTTGTTTGGTAATGGAGTTTTGCCCTGGGGGCGACTTGCATGCGCTTAGGCAGAGACAGCCCGGAAAATTTTTTCCAGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATCTGCACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGACGATGGGCACATAATGCTATCTGATTTTGACCTGTCTCTTAGATGCGCAGTCTCCCCGACACTTGTTAAATCATCAAACTCGGGGTTAGAAGCTAAAAGCTCGGGTTACTGTGCTCAGCCTGCCTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACACCTCGCTTCCTAAGCAGACACAGGAAAGAAAAGAAGTCCAAACCGAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCCGAACCCACAAGTGCAAGATCGATGTCCTTCGTTGGTACACATGAGTACCTGGCACCTGAAATCATAAAAGGTGAAGGCCATGGCAGTGCCGTGGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTTTTGTTCGGCCGAACTCCGTTCAAGGGGGCTGGGAACCGTGCTACTTTGTTTAATGTGGTTGGTCAGCCATTGAGATTTCCTGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCCGAGGTTTGCTTGTAAAAGAACCACAGCATCGTCTCGCTTATAGGCGTGGTGCTACTGAGATCAAGCAACATCCATTCTTCCAGAGCGTGAATTGGGCACTCATCCGCTGTGCCAATCCTCCCGAGGTGCCAAGAGTAGATGTCATTGATTTCTCCTCAAGGATGGAGACACCACACGCACCGGCAGGCGAAAAGATGCCGGGAGTCGATGTGAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTGA 2217 44.7 MKIKTAILYFRDWEINYKELAKLLHFSLCACIVGFDIALIVNQGSLLEFRVSHQQIWPESVFEPELLMEPLVDGMSSLLKTQNPTSTSRNLDSSRQPSPKQSRNEATSSASYPWSQNCAKKPLRHPNGSSVSSKKHPTNLNVQLEGLTDVKNHTHVSNKGKSELVNPTDSSHKSTESSFQKKVPLEGGEAEPLVKHIIDDSKDCCSSGSEESGNQVLNASKGAATQIIDQLKSQPAEISCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIEKSCESIDITNSLDLDKSRKTSVYRGSTGSDISDESNSSSLSNAMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCAQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDVIDFSSRMETPHAPAGEKMPGVDVKPSGNYLEIDFF 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29217918 29221873 - CrPI670011_10g015290.1 Cre10g1529 510831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1529 738 SUPERFAMILY Protein kinase-like (PK-like) 321 708 IPR011009 -
Cre10g1529 738 MobiDBLite consensus disorder prediction 78 151 - -
Cre10g1529 738 Pfam Protein kinase domain 579 682 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1529 738 Pfam Protein kinase domain 347 497 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1529 738 ProSiteProfiles Protein kinase domain profile. 346 682 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1529 738 MobiDBLite consensus disorder prediction 78 186 - -
Cre10g1529 738 Gene3D Transferase(Phosphotransferase) domain 1 430 498 - -
Cre10g1529 738 Gene3D Transferase(Phosphotransferase) domain 1 577 700 - -
Cre10g1529 738 PANTHER FLIPPASE KINASE 1-RELATED 186 702 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cre10g1529 738 MobiDBLite consensus disorder prediction 294 317 - -
Cre10g1529 738 CDD STKc_phototropin_like 345 705 - -
Cre10g1529 738 FunFam serine/threonine-protein kinase D6PK-like 577 700 - -
Cre10g1529 738 SMART serkin_6 346 682 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1529 738 FunFam Serine/threonine-protein kinase D6PK-like 344 429 - -
Cre10g1529 738 Gene3D Phosphorylase Kinase; domain 1 344 429 - -
Cre10g1529 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1529 738 FunFam serine/threonine-protein kinase D6PK-like 430 497 - -
Cre10g1529 738 MobiDBLite consensus disorder prediction 159 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1369 Cre-Chr2:21989427 Cre10g1529 Cre-Chr10:29217918 4.10E-99 dispersed
Cre04g0169 Cre-Chr4:4533337 Cre10g1529 Cre-Chr10:29217918 1.80E-147 dispersed
Cre04g1741 Cre-Chr4:35499566 Cre10g1529 Cre-Chr10:29217918 1.10E-184 dispersed
Cre05g0071 Cre-Chr5:906286 Cre10g1529 Cre-Chr10:29217918 1.00E-181 dispersed
Cre09g0814 Cre-Chr9:8180469 Cre10g1529 Cre-Chr10:29217918 1.40E-53 dispersed
Cre09g2005 Cre-Chr9:39116551 Cre10g1529 Cre-Chr10:29217918 5.70E-44 dispersed
Cre10g1529 Cre-Chr10:29217918 Cre11g0773 Cre-Chr11:4933124 7.30E-114 dispersed
Cre10g1529 Cre-Chr10:29217918 Cre01g1029 Cre-Chr1:16858212 6.60E-200 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64476 PF00069 Pkinase 9.20E-36 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1529 K08286 - csv:101219962 1284.63