Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1544 ATGGCTTCCATTTTCATCCATTCCTCAAACCAATTTCCAATCCATGGAGTTCCCTTCTTCTTCTTCTTCTTCCTTTTCTTCTCTGTTTCTCTCTCAGATCCCCGAATCTCGGAATCCGGTAGCTTCTGTGGAAAATTCAAGCCTCCACCCACATCCGGATTCATACCAACCTTCGTCGAAGAAATGGAAGCCATTTCCGAGCTTCTCACAACTCGCAGTTGGACCACTCACTTCGTCAATTCCACTCCACCAATGTTCGCTTTATCCCAATGCTTCAAAGATCTCTCTCACACTGATTGCCTTCTCTGCTACGCCGCCAGCCGCACCGCCCTTCCCCGCTGCCTCCCTGCCGTCTCCGCCCGGATTTTCCTCGACGGATGCTTCCTCCGGTATGATAATTACAGCTTCTATAAAGAATCCACTGATTCGCTTAGGGATTCTGTGAATTGCACCTCGGACTTGGGGGAAATCGATGAATCTGAGAGGCTAGGGTTTGGGAAGAATGTTAGGCTTGTTGTTGAGACTGTGTCGAGGACGGCCATGGAGAATGGAGGATTTGGGATTGGGGAAGTTAATGGGATGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTTGAGCCTGAGGGATGCAGAGCTTGCTTGGAGAAGGCGAAGAGGAGTATCAGGAGCTGTTTGCCGAGTAGAGAAGGGAGAGCTATGAATGCTGGGTGTTATTTGAGATATTCGACTGTGAAATTCTATAACGATAAGGATGAAGATCGGGATCATGATGGAATTTCTGGAAGAAGAGCAGTAGTTACCATTGCCTTAGCTTCAGCTGCCTCCTTGATCATCTTCTTTTCAGCTGTGTTTGCATGCTATACAAGAATAACAAAGTTCAAGAAAGAAAAGAAAAAGCAATCACTTATTCCAACTTCCTTCAAGGATTCCAATTTGAATTACAAGTATGAAACACTTGAAAAGGCAACTAATTACTTCAACCCATCAAGTAAGATAGGCCAAGGTGGAGCTGGTTCTGTATATAAAGGAACTCTTCCAAATGGGCAGGTTGTTGCTGTGAAGAGATTGGTTTTCCATACCAGGCAATGGGTTGATGAGTTCTTCAATGAGGTGAATTTAATCCGCGGAATCCAACACAAAAACCTTGTTGCCCTTTTAGGTTGCAGCATTGAAGGGCCTGAAAGTCTGCTGGTCTATGAGTATGTTCCGAACCGGAGCCTTGATCAGTTCATTTTCGATAAGAACAAGGTTCAGATTCTAAATTGGAAACAACGTTTCAATATTATTGTGGGAACAGCTGAAGGGCTTGCACATCTTCATGAAGGTTGTAAAATAAGAATAATCCATAGAGACATAAAGAGTAGCAATGTTCTACTGGATGAAAATTTCAATCCGAAGATTGCGGATTTTGGCCTCGCTCGGCATTTTGCAGCCGATCAGTCTCATCTTAGCACAGGAATTGCCGGGACACTGGGTTACATGGCTCCTGAATATCTCGTTCGAGGACAACTTACAGAAAAGGCTGATGTTTATAGTTTTGGAGTGTTGATACTCGAGATCGTTTGTGGTAGAAGAAACAGCTCCTTCACTGAGAATTCTACCCCACTCCTCCAAACAGTTTGGGATCTGTACAAATCAGAGAGATTAACTGAAGCCATTGACACAAGCCTGAACAAGGATTACCCTGCAAAAGAAGCCATGGACGTTCTGCAGATAGGGCTTTTATGCACACAAGCTCTAGCTTCGTTGAGACCGTCAATGGCAACGATCGTGAAACTGCTAACCAGTGATGTAGAAAGGAAGGTTGCCATCCCTGAACAACCTCCATTTTTGAATCCTTGTGGACCTTCAAGAAGGTCTTGCAGAATTAGCAGCTTGGTATCTCATGCAGTTTCCAAACTTGAAGTTTCTTCTTGCACATCAACAGATTCAGGTTCTTCTTCTAACTTGCCTTCAAGAAGTGGAGATTTTGCTGAATTGAGTTCAAACTGA 1989 44.39 MASIFIHSSNQFPIHGVPFFFFFFLFFSVSLSDPRISESGSFCGKFKPPPTSGFIPTFVEEMEAISELLTTRSWTTHFVNSTPPMFALSQCFKDLSHTDCLLCYAASRTALPRCLPAVSARIFLDGCFLRYDNYSFYKESTDSLRDSVNCTSDLGEIDESERLGFGKNVRLVVETVSRTAMENGGFGIGEVNGMFGLAQCWGSVEPEGCRACLEKAKRSIRSCLPSREGRAMNAGCYLRYSTVKFYNDKDEDRDHDGISGRRAVVTIALASAASLIIFFSAVFACYTRITKFKKEKKKQSLIPTSFKDSNLNYKYETLEKATNYFNPSSKIGQGGAGSVYKGTLPNGQVVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVALLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKVQILNWKQRFNIIVGTAEGLAHLHEGCKIRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADQSHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSERLTEAIDTSLNKDYPAKEAMDVLQIGLLCTQALASLRPSMATIVKLLTSDVERKVAIPEQPPFLNPCGPSRRSCRISSLVSHAVSKLEVSSCTSTDSGSSSNLPSRSGDFAELSSN 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29422633 29425702 - CrPI670011_10g015440.1 Cre10g1544 510846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1544 662 ProSiteProfiles Gnk2-homologous domain profile. 145 245 IPR002902 -
Cre10g1544 662 SUPERFAMILY Protein kinase-like (PK-like) 300 593 IPR011009 -
Cre10g1544 662 Gene3D - 147 245 IPR038408 -
Cre10g1544 662 Gene3D - 57 136 IPR038408 -
Cre10g1544 662 FunFam Cysteine-rich receptor-like protein kinase 2 401 601 - -
Cre10g1544 662 FunFam Cysteine-rich receptor-like protein kinase 2 292 400 - -
Cre10g1544 662 MobiDBLite consensus disorder prediction 637 662 - -
Cre10g1544 662 Pfam Salt stress response/antifungal 75 134 IPR002902 -
Cre10g1544 662 Pfam Salt stress response/antifungal 160 242 IPR002902 -
Cre10g1544 662 CDD STKc_IRAK 331 594 - -
Cre10g1544 662 FunFam Cysteine-rich receptor-like protein kinase 3 148 245 - -
Cre10g1544 662 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 174 623 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cre10g1544 662 Gene3D Phosphorylase Kinase; domain 1 285 400 - -
Cre10g1544 662 Gene3D Transferase(Phosphotransferase) domain 1 401 604 - -
Cre10g1544 662 ProSiteProfiles Gnk2-homologous domain profile. 36 136 IPR002902 -
Cre10g1544 662 SMART serkin_6 325 574 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1544 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1544 662 Pfam Protein kinase domain 327 589 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1544 662 FunFam Cysteine-rich receptor-like protein kinase 42 62 136 - -
Cre10g1544 662 ProSiteProfiles Protein kinase domain profile. 325 610 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1718 Cre-Chr8:29476673 Cre10g1544 Cre-Chr10:29422633 4.10E-131 dispersed
Cre09g1881 Cre-Chr9:37413551 Cre10g1544 Cre-Chr10:29422633 1.20E-06 dispersed
Cre10g1544 Cre-Chr10:29422633 Cre10g2306 Cre-Chr10:37307713 2.50E-73 dispersed
Cre11g1173 Cre-Chr11:9566514 Cre10g1544 Cre-Chr10:29422633 7.90E-38 dispersed
Cre05g1144 Cre-Chr5:10955273 Cre10g1544 Cre-Chr10:29422633 2.40E-69 transposed
Cre10g1544 Cre-Chr10:29422633 Cre05g2715 Cre-Chr5:38039352 4.90E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64478 PF00069 Pkinase 6.50E-46 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1544 - - - 0.0