Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1568 ATGAAAGAAAAGAGTGAAAGTGGAGGTGGGTATGTGAGAGCAGATCAAATAGATCTGAAGAGCTTAGACGAGCAGTTACAGAGACATTTGAGCAAAGCATGGACCATGGAGAAGAACAAGAAGAGGGAAGATGAGGAAGGCGTCGGCGTCGGCGGTGGTGGAGGAGGAGGCGTCGGCGGAGGAAGGCCGGCTATCACTAGGCAGGAGTGGGAGATTGACCCTTCTAAACTCATCATCAAAGCCGTCATAGCTCGTGGCACTTTTGGAACTGTTCATCGTGGAATTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGGGAAGAGGGGCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCGGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCAAATGTTACAAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACACATACAAACAGAAAATGGCCAAATTGGCATGCCCAGCAATATTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCTCTGAAATCCTACCTCATAAAGAACAGGAGGAAAAAGCTGGCTTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTTGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACACTTGGGTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTATGGGAAATATACTGCTGCGATATGCCATATCCCGACCTTAGCTTCTCAGAAGTGACATCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGCTGGGATGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATCGACACATCGAAGGGTGGAGGTATGATCCCCCTCGATCAGTCGCAAGGCTGTTTTTGCTTCCGCAGGTACCGGGGGCCTTGA 1143 47.33 MKEKSESGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKKREDEEGVGVGGGGGGGVGGGRPAITRQEWEIDPSKLIIKAVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHIQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29708353 29711780 + CrPI670011_10g015680.1 Cre10g1568 510870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1568 380 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 56 352 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Cre10g1568 380 FunFam Kinase suppressor of Ras 1 66 161 - -
Cre10g1568 380 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1568 380 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1568 380 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1568 380 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1568 380 SMART serkin_6 77 354 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1568 380 MobiDBLite consensus disorder prediction 32 48 - -
Cre10g1568 380 Gene3D Transferase(Phosphotransferase) domain 1 177 367 - -
Cre10g1568 380 FunFam Serine/threonine-protein kinase HT1 177 362 - -
Cre10g1568 380 Pfam Protein tyrosine and serine/threonine kinase 79 351 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1568 380 SUPERFAMILY Protein kinase-like (PK-like) 63 351 IPR011009 -
Cre10g1568 380 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre10g1568 380 MobiDBLite consensus disorder prediction 32 64 - -
Cre10g1568 380 CDD STKc_MAP3K-like 83 351 - -
Cre10g1568 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre10g1568 380 Gene3D Phosphorylase Kinase; domain 1 64 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0687 Cre-Chr9:6542981 Cre10g1568 Cre-Chr10:29708353 2.70E-147 dispersed
Cre10g1568 Cre-Chr10:29708353 Cre11g1556 Cre-Chr11:25129522 4.10E-60 dispersed
Cre01g1270 Cre-Chr1:25948455 Cre10g1568 Cre-Chr10:29708353 5.20E-55 wgd
Cre10g1568 Cre-Chr10:29708353 Cre06g2559 Cre-Chr6:33198767 5.50E-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64481 PF07714 PK_Tyr_Ser-Thr 2.20E-64 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1568 - - - 0.0