Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1568 | ATGAAAGAAAAGAGTGAAAGTGGAGGTGGGTATGTGAGAGCAGATCAAATAGATCTGAAGAGCTTAGACGAGCAGTTACAGAGACATTTGAGCAAAGCATGGACCATGGAGAAGAACAAGAAGAGGGAAGATGAGGAAGGCGTCGGCGTCGGCGGTGGTGGAGGAGGAGGCGTCGGCGGAGGAAGGCCGGCTATCACTAGGCAGGAGTGGGAGATTGACCCTTCTAAACTCATCATCAAAGCCGTCATAGCTCGTGGCACTTTTGGAACTGTTCATCGTGGAATTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGGGAAGAGGGGCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCGGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCAAATGTTACAAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACACATACAAACAGAAAATGGCCAAATTGGCATGCCCAGCAATATTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCTCTGAAATCCTACCTCATAAAGAACAGGAGGAAAAAGCTGGCTTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTTGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACACTTGGGTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTATGGGAAATATACTGCTGCGATATGCCATATCCCGACCTTAGCTTCTCAGAAGTGACATCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGCTGGGATGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATCGACACATCGAAGGGTGGAGGTATGATCCCCCTCGATCAGTCGCAAGGCTGTTTTTGCTTCCGCAGGTACCGGGGGCCTTGA | 1143 | 47.33 | MKEKSESGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKKREDEEGVGVGGGGGGGVGGGRPAITRQEWEIDPSKLIIKAVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHIQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 29708353 | 29711780 | + | CrPI670011_10g015680.1 | Cre10g1568 | 510870 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1568 | 380 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 56 | 352 | IPR051681 | GO:0004674(PANTHER)|GO:0005886(PANTHER) | |
Cre10g1568 | 380 | FunFam | Kinase suppressor of Ras 1 | 66 | 161 | - | - | |
Cre10g1568 | 380 | PRINTS | Tyrosine kinase catalytic domain signature | 212 | 230 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1568 | 380 | PRINTS | Tyrosine kinase catalytic domain signature | 322 | 344 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1568 | 380 | PRINTS | Tyrosine kinase catalytic domain signature | 278 | 300 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1568 | 380 | PRINTS | Tyrosine kinase catalytic domain signature | 174 | 187 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1568 | 380 | SMART | serkin_6 | 77 | 354 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1568 | 380 | MobiDBLite | consensus disorder prediction | 32 | 48 | - | - | |
Cre10g1568 | 380 | Gene3D | Transferase(Phosphotransferase) domain 1 | 177 | 367 | - | - | |
Cre10g1568 | 380 | FunFam | Serine/threonine-protein kinase HT1 | 177 | 362 | - | - | |
Cre10g1568 | 380 | Pfam | Protein tyrosine and serine/threonine kinase | 79 | 351 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1568 | 380 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 351 | IPR011009 | - | |
Cre10g1568 | 380 | ProSiteProfiles | Protein kinase domain profile. | 77 | 354 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre10g1568 | 380 | MobiDBLite | consensus disorder prediction | 32 | 64 | - | - | |
Cre10g1568 | 380 | CDD | STKc_MAP3K-like | 83 | 351 | - | - | |
Cre10g1568 | 380 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 218 | 230 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre10g1568 | 380 | Gene3D | Phosphorylase Kinase; domain 1 | 64 | 161 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g0687 | Cre-Chr9:6542981 | Cre10g1568 | Cre-Chr10:29708353 | 2.70E-147 | dispersed | |
Cre10g1568 | Cre-Chr10:29708353 | Cre11g1556 | Cre-Chr11:25129522 | 4.10E-60 | dispersed | |
Cre01g1270 | Cre-Chr1:25948455 | Cre10g1568 | Cre-Chr10:29708353 | 5.20E-55 | wgd | |
Cre10g1568 | Cre-Chr10:29708353 | Cre06g2559 | Cre-Chr6:33198767 | 5.50E-190 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64481 | PF07714 | PK_Tyr_Ser-Thr | 2.20E-64 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1568 | - | - | - | 0.0 |