Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1582 ATGGATCTGGAGAGTGCTATTGGGGGCCACCCAATCAAGAAAGATTCATGGAGAGCTGTTTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTTTATGGCGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGTACTTTTGCTGAGGATATTCAGCACTCTGAATCCAACGAAGAGATTTATGGAGTTCTTTCTTTTGTTTTCTGGACTCTCACGCTCATTCCTTTGATTAAGTACGTTTTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGAGGAACTTTCGCTTTGTACTCATTGCTCTGCCGCCATGCCCGAGTTAGCTCCTTGCCCAATTGCCAACTTGCAGATGAGGACCTTTCGGAATATACAAAAGATGGGATGGATTTAACCAACAAGAATACTTGTGGGTCGAGATTGAAATCGACATTAGAGAAGCACAGAGTGCTGCAGAGGGTTTTGCTTGTTCTAGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTGCAATTTCTGTTTTCTCTGCGGTTTCTGGGCTGGAATTTTCCATGGCTAGAGAACACCATCGCTATGTTGAAGTCCCGGTTGCTTGTGCCATATTGGTAATCCTGTTTGCGATTCAACATTATGGAACCCATCGAGTTGGGTTTCTGTTTGCACCAGTTGTAATTACCTGGCTCCTGTGTATCAGTTCCATAGGGCTGTACAATATCTTCCACTGGAATCCACATGTTTACCGAGCACTCTCCCCATATTATATGTACAAATTTCTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTCGGCGGAATCCTGTTGTGTATTACAGGTTCAGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCTATCAAGATTGCTTTCTCTTTTGTGGTTTATCCATCTTTGGTCCTGGCATACATGGGACAAGCTGCTTATCTTTCTCAACATCATGGTGCGGAAAGTAACTACCGAATTGGATTTTACGTGTCTGTTCCTGAGAAAATAAGAGTGCCTGTTCTTGTGATCGCCATTTTAGCCGCAGTGGTAGGAAGTCAAGCTGTCATTACTGGGACTTTTTCGATAATAAAACAGTGCTCCTCATTGGGTTGCTTCCCGAGGGTCAAAATTGTTCATACCTCCTCGAAAATCCATGGTCAGATTTATATACCGGAGATCAACTGGACGTTGATGCTCTTATGCTTGGCTATTACCATTGGCTTTCGAGACACGAAACGCATGGGCAATGCATCAGGCTTAGCAGTGATAACTGTTATGCTGGTGACAACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGCATAAAAGCTTTCTCTATGCCATTGCCTTCATACTCATTTTCGGGTCAATCGAATCACTTTACTTTTCAGCATCTCTCATCAAGTTTCGAGAAGGGGCCTGGGTTCCCATCGCCCTCTCATTCATCTTCCTAATAGTCATGTATGTATGGCATTACGGAACGCGCAAAAAATACGAATTTGATGTTCAAAACAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGTCCCAGTTTAGGCATTGTGAGAGTACGCGGGATTGGCCTCATATACACCGAACTCGTGTCAGGAATCCCCGCCATCTTCTCCCACTTCGTAACAAACCTCCCCGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCCGTCCCTGTCCCACACGTGAGACCAGGAGAAAGGTTCCTAGTAGGACGAGTTGGGCCAAAAGAGTACCGTCTCTACCGATGCATAGCACGATATGGCTATCGTGACATCCACAAAGACGACATGGAGTTCGAGAAGGACTTGGTGTGCAGCATTGCCGAGTTCATCCGGTCCGAAAAGGCAGAGACAAGCGTAAAGCTAGAAGATGTAGAAGAAAGTGAGAGAATGACAGTAGTTGGGACATCTTCAACACATGCAGATGGAGTGAGAATGTGTGAAGATGAAGGAGAAACAGCAGAAACATCAGAGGTAAGAGAGATAAAATCACCAAAAAAGCTGAGAAAAAGAGTGAGGTTTGTTGTACCAGAGAGTCCACGAATGGAAATGGAAACAAGGAGGGAGCTGCAAGAGCTAATGGAAGCAAGAGAAGCAGGAATGGCTTTCATAATGGGACATTCATATGTGAAAGCAAAGAGAGGATCAGGTTTGGTGAAGAAAGTGGTGATAAATTATGGGTATGATTTTTTGAGAAGAAACTCAAGAGGGCCAAGTTATGCTTGGAGTGTGCCTCATGCATCTACTTTAGAGACCAATCACTATAATCCATTTCATCGCCTTCTCAACTTGATTCTCTCGTCGCCATGTTCGCCGTTTCGACGACATTTTTCCACTCTGTTTAACCGAGCATCCAAAAATGGCGAGGCGTTGGGCGTTTTCGTTTTCATTGCAGAAATTGTTGCTGGGGTTTTGTCCAAGGCGGTTTCGGCTCTTGTGAGTTGGATATGGGCGATCACCTCGGCCTCTAATACTGCGGTTTCTACCCGCTCCATGATTAAATTTGAGAGGGGATATGTTGTTGAGACCTTGTTTGATGGTAGTAAGCTGGGGATTGAGCCTTACTCTGTGGGGGTATCTCCTAATGGGGAGCTTCTGATTTTGGATGCTGAAAATAGTAATGTTCACAAAATCTCTATGCCAGTTTCTCAATTTTGCAGGCCCAAGCTGTTGGCAGGATCATCTGAAGGATATTCTGGACATGTAGATGGAAAGCTAAGGGATGCAAGAATGAGCCATCCAAGAGGGTTAACTGTGGATCAAAGAGGAAATATTTACATTGCAGATACAAAGAATAAGGCTATAAGAAAAATCAGTGATGCCGGAGTTACGACAATAGCTGGTGGCAAATGGAGGAAAAGTGGCCATATTGATGGTCCAAGTGAAGAATCAAAGTTCTCAAATGATTTTGATGTGGTTTATGTAGGAAGCAGCTGCTCACTTTTGGTAGTCGACAGAGGAAATCAGGCAATTCGGGAGATTCAACTTCGGGCTGATGATTGTACAGAGTATGATGCTAGCTTCCTTCTAGGGATGGCTCTGCTGACTGCTGCTATGCTTTTGGGATACATGTTGGCACGTTTACAATTTCGGGTGTTGGCCACGTTTTCTTCTAAAAATGATGCAAGAGTTGACTCGAGGAATGTTACATCGATTCCTCCATATGAGAGGGTCGAGAAATCAGTCAGGCATCCGTTGATTCCTAGTGAAGAGGAAGACGATAATCAGCCAGAAGAGAATATCATTTGTTCCCTTGGCAAGCTTTTCCTCAACACTGGCTCATCTGCAGCCGAAATCTTTGTGGCATTGCTTCTTGGAGCTAGAAGAAAGGCGTCCAACTCCCACGGCCAGCAGCATTATCAAGTAAACAAACATGCGCCATCACGGTTCGGTATGCAGGAAAACTTCACAGCCTCACATGGTCGTGAACCGCTGGAAACAACGACCAGGAAACCTTACTCTTATTCGGCCACACAACTCGGAAACGTCCAGCGTTACAGGCGCATTTGGGGCGACGGCAGTGGAGGGGAAGAACAACCATATCCATCCAGTCCAAAGGTGTGGTACAACAGGAGCAGTGAGAGAAATGAGAGAAATGAGGTTGTGTTTGGTGAAGTACAAGAGGAAGAGCAACTGTGTGGACAAAATGAAGGGAAATGCTGTGTTGGTGGTGGTGGCTGTGTGGAAGGGAGATCCTTCAGCAATAATAAACATGAAAATGCTTTTGTTACAGAAAAAAGGAGAATGAGAGATTAA 3798 44.87 MDLESAIGGHPIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSESNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGMDLTNKNTCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLEFSMAREHHRYVEVPVACAILVILFAIQHYGTHRVGFLFAPVVITWLLCISSIGLYNIFHWNPHVYRALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHGAESNYRIGFYVSVPEKIRVPVLVIAILAAVVGSQAVITGTFSIIKQCSSLGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITIGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFLYAIAFILIFGSIESLYFSASLIKFREGAWVPIALSFIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEKAETSVKLEDVEESERMTVVGTSSTHADGVRMCEDEGETAETSEVREIKSPKKLRKRVRFVVPESPRMEMETRRELQELMEAREAGMAFIMGHSYVKAKRGSGLVKKVVINYGYDFLRRNSRGPSYAWSVPHASTLETNHYNPFHRLLNLILSSPCSPFRRHFSTLFNRASKNGEALGVFVFIAEIVAGVLSKAVSALVSWIWAITSASNTAVSTRSMIKFERGYVVETLFDGSKLGIEPYSVGVSPNGELLILDAENSNVHKISMPVSQFCRPKLLAGSSEGYSGHVDGKLRDARMSHPRGLTVDQRGNIYIADTKNKAIRKISDAGVTTIAGGKWRKSGHIDGPSEESKFSNDFDVVYVGSSCSLLVVDRGNQAIREIQLRADDCTEYDASFLLGMALLTAAMLLGYMLARLQFRVLATFSSKNDARVDSRNVTSIPPYERVEKSVRHPLIPSEEEDDNQPEENIICSLGKLFLNTGSSAAEIFVALLLGARRKASNSHGQQHYQVNKHAPSRFGMQENFTASHGREPLETTTRKPYSYSATQLGNVQRYRRIWGDGSGGEEQPYPSSPKVWYNRSSERNERNEVVFGEVQEEEQLCGQNEGKCCVGGGGCVEGRSFSNNKHENAFVTEKRRMRD 1265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29861172 29872582 + CrPI670011_10g015820.1 Cre10g1582 510884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1582 1265 NCBIfam potassium uptake protein 23 765 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre10g1582 1265 Pfam K+ potassium transporter integral membrane domain 23 519 IPR053951 -
Cre10g1582 1265 Pfam K+ potassium transporter C-terminal domain 533 766 IPR053952 -
Cre10g1582 1265 Pfam NHL repeat 926 951 IPR001258 GO:0005515(InterPro)
Cre10g1582 1265 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 766 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre10g1582 1265 Gene3D - 814 1009 IPR011042 -
Cre10g1582 1265 SUPERFAMILY NHL repeat 844 1012 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1386 Cre-Chr7:28764331 Cre10g1582 Cre-Chr10:29861172 2.10E-62 dispersed
Cre10g1217 Cre-Chr10:24847580 Cre10g1582 Cre-Chr10:29861172 1.90E-165 dispersed
Cre10g1582 Cre-Chr10:29861172 Cre11g0535 Cre-Chr11:2351729 3.20E-186 dispersed
Cre01g0569 Cre-Chr1:4995936 Cre10g1582 Cre-Chr10:29861172 4.60E-115 transposed
Cre05g1412 Cre-Chr5:16837140 Cre10g1582 Cre-Chr10:29861172 8.90E-246 transposed
Cre07g0885 Cre-Chr7:7660789 Cre10g1582 Cre-Chr10:29861172 7.60E-287 transposed
Cre01g0568 Cre-Chr1:4987854 Cre10g1582 Cre-Chr10:29861172 0.00E+00 wgd
Cre10g1582 Cre-Chr10:29861172 Cre05g2687 Cre-Chr5:37815408 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1582 K03549 - csv:101211664 1459.51