Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1584 ATGGACCGCAGTTTTCTATACAACCAATTCGCTCCACTCGCTGGAATGATCGCCGCCGAGTGCGCCACCGTCGGCTCAAACACCGTCTACAAAGCCATTAGCGGCCATGAAATCAGCTTCTATGTCTTCACCTTCTACACTTGTCTCGCTGCCGCTCTCGTTCTTCTTCCTTTCGCCTTAATCTTCCGCAGATCTGGCGTTTTTCCGTCCCATAAGTTGTCGTTCTTCCTCAGATTGATCAGCCTGTCGGCGATGGGAGTTGGATGTCAGCTGTTTTCGTATAAAGGTTTGGAATACAGTTCGCCGACGCTTGCTTCCGCCATTAGCAATCTCATTCCAGCTCTCACTTTCATCTTGGCCGTTCTCTTTGGGATGGAGAAACTAGCTTTGAGAAGCTCAAGCAGCATAGCCAAAATCGTTGGCTCGACAGTCTCCATAACAGGTGCACTAGTAGTGGTTCTCTATAAAGGTCCAGTCATTCTATCAAACCCATTTTCTAGGCCAACCAGATTGAATCTTCCTCCTCGTCGTTTGGGCTCTTCCCAACCAAATTGGATAATGGGTGGCCTCTGCTTTTTTGCTCAGTACCTTCTCAACTCTTTCTGGTACATTGTTCTGACCCAAACGATGAACATATATCCAGATGAACTAGTTGTGGTGTGCTTATTTTATGTGTTCGAGGTCATAATAGCTGCACCAATATGCCTATTAGCGGAAGGAAACATCGGTGCTTGGAAGCTGAAAAATGGTCTGGAAGTGGTTGCTGTTGTAAACTCGGGATGTGTGGGTCAATCCTTCGTCTCTGCAATCCACACATGGGGTGTACATGTCAAAGGGCCTGTTTATGTATCAAGTTTCAGGCCACTCTCAATTGCAATTGCTGCTGCTACAGGTGTTATCTTCCTTGGGGACGATCTTCATCTTGGAAGTATTATTGGAGCAATGATAATAGCAAGTGGGTTTTACTCTATAATGTGGGGGAAAATAAAAGAAGAGGACTTAAAGGGACAGGATGCCTTCTCAAGCTTGAAGTCTTCATCAACAGATAAGATTCCATTGTTGAAAAGCTGTAAAGTTCAAAATGACTAA 1089 45.27 MDRSFLYNQFAPLAGMIAAECATVGSNTVYKAISGHEISFYVFTFYTCLAAALVLLPFALIFRRSGVFPSHKLSFFLRLISLSAMGVGCQLFSYKGLEYSSPTLASAISNLIPALTFILAVLFGMEKLALRSSSSIAKIVGSTVSITGALVVVLYKGPVILSNPFSRPTRLNLPPRRLGSSQPNWIMGGLCFFAQYLLNSFWYIVLTQTMNIYPDELVVVCLFYVFEVIIAAPICLLAEGNIGAWKLKNGLEVVAVVNSGCVGQSFVSAIHTWGVHVKGPVYVSSFRPLSIAIAAATGVIFLGDDLHLGSIIGAMIIASGFYSIMWGKIKEEDLKGQDAFSSLKSSSTDKIPLLKSCKVQND 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29891533 29898310 + CrPI670011_10g015840.1 Cre10g1584 510886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1584 362 PANTHER WAT1-RELATED PROTEIN 15 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre10g1584 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
Cre10g1584 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 330 - -
Cre10g1584 362 Pfam EamA-like transporter family 21 146 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g0506 Cre-Chr10:4243638 Cre10g1584 Cre-Chr10:29891533 2.80E-20 dispersed
Cre10g1584 Cre-Chr10:29891533 Cre11g1745 Cre-Chr11:29068755 3.50E-37 dispersed
Cre10g1584 Cre-Chr10:29891533 Cre10g1586 Cre-Chr10:29908025 1.10E-120 proximal
Cre01g0574 Cre-Chr1:5034716 Cre10g1584 Cre-Chr10:29891533 3.50E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1584 - - - 0.0