Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1586 ATGGAGAGAAGCTTGTTTTACAAAGATGTTGTGCCATTCGCCGCCATGGTTGCGGCGGAGTGCGCCACCGTTGGCTCCAACACCGGCTTCAAAGCCGCCACAGCTAGAGGCATCAGCTACTACGTCTTCACCCTCTACGTTTGTATGGTCGCCGCCGCCGCCCTCGTCCCGTTTGCAGTTATCTTTCATAAGTCGCCGGAGCTTCCTCCCAACAGAATTTCCTTTTTCTTCAAAATCGTCTGCCTCTCCGCGCTCGGACTATCGTGCCAATTGCTTGGAAACAAAGGACTTGAGTACAGCTCACCAACTCTTTCATCCGCCATTAGCAACCTAATTCCAGCTTTCACTTTCATTATGGCTGTCTTTTTTAGGATGGAAAAGATAGATTTGAAAAGAAGCAGCAGCATAGTGAAAATTGTGGGGTCAACAGTGTCCATAGCAGGTGCTTTGGTAGTGGTTTTGTACAAAGGCCCAATTGTGATATCAAACCCATATTCTCATGGCCCAAAAGAGTTGGGCCTCCTTTATCAAAATTCCCCTTTGGGCTCTTCACATCCACAGCCCAATTGGATAATGGGTGGCCTTTGCTTTGTTTTTCAATACCTTTGCAACTCCTTTTGGTACATTCTTCAGACCCAAATCATAAAAATTTACCCAGATGAGGTAAGTGTGGTGGCAGTATACTACGTTATCCAGGCAGTTTTAACTGCCCCAATTTGTTTGATAGCAGAAACAGATATGAGTGCTTGGAAGCTAACAAATCCACTCAGTTTTCTTTTGATTTTCAACTCGGGTTTGATGGGGCAGTCTTTTGTGGCTGCCATTCACACATGGGGACTAAACTTGAAGGGACCTGTTTATGTGTCTAGTTTTAGGCCATTGTCCATTGCCATTGCAGCTGCTATGGGTGCCCTTCTCCTTGGTGATGATCTTCATCTTGGAAGTATAATTGGAGCAATCATAATATCAATTGGATTCTATGGCATATTGTGGGGAAAAGCAAAAGAAGAAGAATTGAAGGAATTAGATGGTGTTTGTGGGTTGGAATCTTCATCCAAAGCTCCATTGCTGCAATATTATAGAGTTGAAGATGCATAA 1098 44.35 MERSLFYKDVVPFAAMVAAECATVGSNTGFKAATARGISYYVFTLYVCMVAAAALVPFAVIFHKSPELPPNRISFFFKIVCLSALGLSCQLLGNKGLEYSSPTLSSAISNLIPAFTFIMAVFFRMEKIDLKRSSSIVKIVGSTVSIAGALVVVLYKGPIVISNPYSHGPKELGLLYQNSPLGSSHPQPNWIMGGLCFVFQYLCNSFWYILQTQIIKIYPDEVSVVAVYYVIQAVLTAPICLIAETDMSAWKLTNPLSFLLIFNSGLMGQSFVAAIHTWGLNLKGPVYVSSFRPLSIAIAAAMGALLLGDDLHLGSIIGAIIISIGFYGILWGKAKEEELKELDGVCGLESSSKAPLLQYYRVEDA 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29908025 29915217 + CrPI670011_10g015860.1 Cre10g1586 510888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1586 365 Pfam EamA-like transporter family 23 146 IPR000620 GO:0016020(InterPro)
Cre10g1586 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Cre10g1586 365 PANTHER WAT1-RELATED PROTEIN 14 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre10g1586 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0574 Cre-Chr1:5034716 Cre10g1586 Cre-Chr10:29908025 2.60E-49 dispersed
Cre01g0575 Cre-Chr1:5051651 Cre10g1586 Cre-Chr10:29908025 2.00E-78 dispersed
Cre10g1586 Cre-Chr10:29908025 Cre11g1745 Cre-Chr11:29068755 4.30E-43 dispersed
Cre10g1584 Cre-Chr10:29891533 Cre10g1586 Cre-Chr10:29908025 1.10E-120 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1586 - - - 0.0