Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1596 ATGGAGATTCTGAAGTTTCTCTTCATTCTTCTCTCTACGGCGGCGTTTTTGTCTCTATCGGAATCCGCTCCTCTCTCGGCGAATTACTACCAGAAATCCTGCCCGAGATTCAGTCAGATTATCCAAGATACAGTCACCAACAAGCAGATCACTAGCCCTTCCACCGCCGCCGGAACTCTTCGTCTCTTGCTCCACGACTGTCTTCCTAACGGCTGCGATGGCTCCGTCCTCATCTCCTCCACTCCCTTCAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCTCTCCCAGGCGACGCCTTCGATGTTATTGTTCGGGCCAAGACTGCTCTCGAGCTCGCATGTCCCAACACCGTCTCCTGTGCTGACATTCTCGCCGTTGCCACTCGCGACCTCGTCACCATGGTTGGCGGACCTTACTACAATGTTCTCCTCGGTCGCAGAGATGGCCGAGTGTCTAAAGCTTCGACGATTCCTGGTGCTCTACCGAAAGCTACCTCGCCGATTCCTCAGATTATTGATATTTTTAAAGCTCGGGGGTTTACTATCCAGGAAATGGTAGCGTTAAGTGGTGCTCATACGATTGGATTCTCGCATTGTAAGGAATTCAGCTCTCAGATCTATAATTATAGCAAGTCGTCTTCGTATGATTCGCAGTATAACCCTAGATTCGCGCAAGGATTGCAGAAGGCTTGTTCTGGTTTTGAAAAGAATCCTACATTATCGGTTTTCAATGACATTATGACTCCCAATAAATTTGATAACTCTTACTTCCAGAATCTGCCGAAGGGATTGGGGATCTTGCAGTCTGATCATGGGTTGTATAATGATTGGAGGACGAGGCCATTCGTAGAGGCGTATGCGGCAGATGAGAAAAAGTTCTTCAACGATTTTGCTCGGGCGATGGAGAAGTTGAGTAATTATAAAGTTGTGACAGGCAATCAAGGGGAGATTCGGCATAAGTGTGATGCGATTAATTGA 981 48.22 MEILKFLFILLSTAAFLSLSESAPLSANYYQKSCPRFSQIIQDTVTNKQITSPSTAAGTLRLLLHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELACPNTVSCADILAVATRDLVTMVGGPYYNVLLGRRDGRVSKASTIPGALPKATSPIPQIIDIFKARGFTIQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSYDSQYNPRFAQGLQKACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPKGLGILQSDHGLYNDWRTRPFVEAYAADEKKFFNDFARAMEKLSNYKVVTGNQGEIRHKCDAIN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30072817 30073797 + CrPI670011_10g015960.1 Cre10g1596 510898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1596 326 Gene3D Peroxidase, domain 2 163 305 - -
Cre10g1596 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 PANTHER - 9 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 FunFam Peroxidase 28 168 - -
Cre10g1596 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre10g1596 326 FunFam Peroxidase 163 305 - -
Cre10g1596 326 Pfam Peroxidase 42 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cre10g1596 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre10g1596 326 Gene3D - 28 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g1596 Cre-Chr10:30072817 Cre11g1193 Cre-Chr11:9770968 1.20E-71 dispersed
Cre01g0584 Cre-Chr1:5127620 Cre10g1596 Cre-Chr10:30072817 2.00E-132 wgd
Cre01g1290 Cre-Chr1:26128940 Cre10g1596 Cre-Chr10:30072817 1.20E-108 wgd
Cre10g1596 Cre-Chr10:30072817 Cre06g2540 Cre-Chr6:33040600 3.90E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1596 K00430 - csv:101219829 628.632