Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1597 ATGGCCGCCGCCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTAAAATCCCACGACTGTCCTAAATCCGATCGGAACAGCCGAAAAGTGGTGGTTTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGAAAGGACGGCGGCGACGAGACCAGGATTTTGGAAAGGCATCACGAATCGGGAGATTGCGATCCGAGCAAGAAGAAGAAGCCTACATGTGCGGTGAGGCGGTGCCGGGAGATTCTTACGTTTTCCAATACTTGTGTTTGTAAAACCTGCCGGATGAAGGTGTGCTTGAAACACCGGTTTCCGGCGGAGCATGGTTGTGGACGGCCGTCGTCGACGGCAGCGGCGGTGGTAGATAAAGGGCGGTGGAATGAAAAGTTTATGGCGGCTTTGGGGTTGAGGAGCGGTGGCGATTGTGGGAAGAGGGAACGGCCGACGGCGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGA 585 56.58 MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGLKSHDCPKSDRNSRKVVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKTCRMKVCLKHRFPAEHGCGRPSSTAAAVVDKGRWNEKFMAALGLRSGGDCGKRERPTAAKGSSPTAPSVKAC 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30079462 30080140 + CrPI670011_10g015970.1 Cre10g1597 510899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1597 194 Gene3D - 81 157 IPR035896 -
Cre10g1597 194 SMART AN1_Zf_4 17 56 IPR000058 GO:0008270(InterPro)
Cre10g1597 194 SMART AN1_Zf_4 104 145 IPR000058 GO:0008270(InterPro)
Cre10g1597 194 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 9 169 - GO:0005737(PANTHER)
Cre10g1597 194 Pfam AN1-like Zinc finger 104 142 IPR000058 GO:0008270(InterPro)
Cre10g1597 194 Pfam AN1-like Zinc finger 17 55 IPR000058 GO:0008270(InterPro)
Cre10g1597 194 SUPERFAMILY AN1-like Zinc finger 96 148 IPR035896 -
Cre10g1597 194 ProSiteProfiles Zinc finger AN1-type profile. 98 148 IPR000058 GO:0008270(InterPro)
Cre10g1597 194 Gene3D - 2 70 IPR035896 -
Cre10g1597 194 MobiDBLite consensus disorder prediction 169 194 - -
Cre10g1597 194 SUPERFAMILY AN1-like Zinc finger 10 58 IPR035896 -
Cre10g1597 194 ProSiteProfiles Zinc finger AN1-type profile. 11 59 IPR000058 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0426 Cre-Chr4:14967284 Cre10g1597 Cre-Chr10:30079462 2.00E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1597 - - - 0.0