Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1597 | ATGGCCGCCGCCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTAAAATCCCACGACTGTCCTAAATCCGATCGGAACAGCCGAAAAGTGGTGGTTTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGAAAGGACGGCGGCGACGAGACCAGGATTTTGGAAAGGCATCACGAATCGGGAGATTGCGATCCGAGCAAGAAGAAGAAGCCTACATGTGCGGTGAGGCGGTGCCGGGAGATTCTTACGTTTTCCAATACTTGTGTTTGTAAAACCTGCCGGATGAAGGTGTGCTTGAAACACCGGTTTCCGGCGGAGCATGGTTGTGGACGGCCGTCGTCGACGGCAGCGGCGGTGGTAGATAAAGGGCGGTGGAATGAAAAGTTTATGGCGGCTTTGGGGTTGAGGAGCGGTGGCGATTGTGGGAAGAGGGAACGGCCGACGGCGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGA | 585 | 56.58 | MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGLKSHDCPKSDRNSRKVVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKTCRMKVCLKHRFPAEHGCGRPSSTAAAVVDKGRWNEKFMAALGLRSGGDCGKRERPTAAKGSSPTAPSVKAC | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 30079462 | 30080140 | + | CrPI670011_10g015970.1 | Cre10g1597 | 510899 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1597 | 194 | Gene3D | - | 81 | 157 | IPR035896 | - | |
Cre10g1597 | 194 | SMART | AN1_Zf_4 | 17 | 56 | IPR000058 | GO:0008270(InterPro) | |
Cre10g1597 | 194 | SMART | AN1_Zf_4 | 104 | 145 | IPR000058 | GO:0008270(InterPro) | |
Cre10g1597 | 194 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 9 | 169 | - | GO:0005737(PANTHER) | |
Cre10g1597 | 194 | Pfam | AN1-like Zinc finger | 104 | 142 | IPR000058 | GO:0008270(InterPro) | |
Cre10g1597 | 194 | Pfam | AN1-like Zinc finger | 17 | 55 | IPR000058 | GO:0008270(InterPro) | |
Cre10g1597 | 194 | SUPERFAMILY | AN1-like Zinc finger | 96 | 148 | IPR035896 | - | |
Cre10g1597 | 194 | ProSiteProfiles | Zinc finger AN1-type profile. | 98 | 148 | IPR000058 | GO:0008270(InterPro) | |
Cre10g1597 | 194 | Gene3D | - | 2 | 70 | IPR035896 | - | |
Cre10g1597 | 194 | MobiDBLite | consensus disorder prediction | 169 | 194 | - | - | |
Cre10g1597 | 194 | SUPERFAMILY | AN1-like Zinc finger | 10 | 58 | IPR035896 | - | |
Cre10g1597 | 194 | ProSiteProfiles | Zinc finger AN1-type profile. | 11 | 59 | IPR000058 | GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g0426 | Cre-Chr4:14967284 | Cre10g1597 | Cre-Chr10:30079462 | 2.00E-35 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1597 | - | - | - | 0.0 |