Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre10g1652 | ATGATGTGGAATAATTGGATATGGGTGGTGGGTTTATTATGGTTGTTGGGATTATGGGGATGGAGAGTTGTGAATTGGGTTTGGGTTAGGCCGAAAAAGCTTGAGAAGTTCTTGAGACAGCAAGGCCTCGCCGGCAACTCTTATCGCTTTCTCTTGGGGGATACAAAGGAGATTGCGGCGGCCGTCCACCAAGCCAGATCGCAGCCGATGACCTTCTCCCATGATATTGCCCCACGCGCCACCCCTACCTCTCATACCACCATCCACAAATACGGTAAGGATTCTTTCACATGGGTTGGCACAACTCCAAGAGTGTATATAACAGAGCCTGAACAAGTGAAGATTGTTTTTTCTCAAATAAATGATATTCGTAAGACATCTTCTTTTCCCCTTAGACGAAGAGTGGGAAGTGGGCTTGTCTCTCTTGAGGGTTCTAAATGGGCTAAACATAGAAAGATCATCAACCCTGCATTTCACATGGAGAAGTTGAAGGAAATGTTTCCAGCATTCTCCAAGAGTTGTGGAGAGATGGTTAACAAATGGGAAAAGATGATTCCTGAAGAAGGACGTTGTGAAATAGATGTGTGGCCTGATTTGCAAAATATGGCTGCCGATGTGATTTCTAGAACTGCATTTGGAAGTAGTTACGAGGAAGGGGAAAAGATCTTCCAGCTCTTGAAAGAGTGGGCTAAGCTATTGATGACATACCTAACAAAGGGAGCTTATTTCATTCCAGGGTTGAGGTATATGCCAACAAAATTAAACAAGAGAATGGGAGAGATTGATAGGAAAATACGAGATATGGTTTGGGGTATTATAAGCAAAAGACAGAATGCTATGAAGAAAGGTGAAGGTTCCAATAATGAAGATCTATTAGGCATTCTTTTAGAATCAAATGCAAATCAAATTGAAGAACAAAAAAACAAGAAAGATGTTGGAATGAGCATAGAAGAAGTAATAAGTGAATGCAGGCTTTTCTACTTTGCTGGGCAAGAAACCACAGCTGCATTGCTTGCTTGGACAATGGTTCTACTTGGTCGATACTCAGAGTGGCAAGACCGAGCAAGAGCAGAAGTCTTTGAAGTTTTTGGTGATAATAAGAAATGGAATTTTGATGGTCTAAGTCGTCTAAGAGTAGTAACTATGATCCTAAATGAAGTCCTTAGGCTATACCCTCCCGTTGGAATGCTAGCTCGAGAGATTCACAAGGAAACAAAATTGGGAAATGTTACATTACCAGTTGGAGTATCAATAGGAATACCAATATTATCCATACACCATGACCCAAAAATATGGGGTGAAGATGCACTTGAGTTCAAACCAGAAAGATTTTCAGAAGGAATTTCCAAAGCAACAAAGAATCAAGTATGCTTTATCCCTTTTGGATGGGGTCCTCGAATTTGCCTTGGCCAAAACTTTGCGTTGATTGAAGCCAAAATAGCATTATCCATGATTTTGCAACAATTCTCATTCACACTTTCTCCAACTTATACTCATGCTCCTATTGCAAACATCACTATTCAACCACAACATGGGGCTCATCTCGTCCTTCGTAAGCTATAA | 1563 | 41.01 | MMWNNWIWVVGLLWLLGLWGWRVVNWVWVRPKKLEKFLRQQGLAGNSYRFLLGDTKEIAAAVHQARSQPMTFSHDIAPRATPTSHTTIHKYGKDSFTWVGTTPRVYITEPEQVKIVFSQINDIRKTSSFPLRRRVGSGLVSLEGSKWAKHRKIINPAFHMEKLKEMFPAFSKSCGEMVNKWEKMIPEEGRCEIDVWPDLQNMAADVISRTAFGSSYEEGEKIFQLLKEWAKLLMTYLTKGAYFIPGLRYMPTKLNKRMGEIDRKIRDMVWGIISKRQNAMKKGEGSNNEDLLGILLESNANQIEEQKNKKDVGMSIEEVISECRLFYFAGQETTAALLAWTMVLLGRYSEWQDRARAEVFEVFGDNKKWNFDGLSRLRVVTMILNEVLRLYPPVGMLAREIHKETKLGNVTLPVGVSIGIPILSIHHDPKIWGEDALEFKPERFSEGISKATKNQVCFIPFGWGPRICLGQNFALIEAKIALSMILQQFSFTLSPTYTHAPIANITIQPQHGAHLVLRKL | 520 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 30738190 | 30742729 | + | CrPI670011_10g016520.1 | Cre10g1652 | 510954 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre10g1652 | 520 | CDD | CYP72 | 82 | 516 | - | - | |
| Cre10g1652 | 520 | PRINTS | E-class P450 group I signature | 202 | 220 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | E-class P450 group I signature | 88 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | Pfam | Cytochrome P450 | 89 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | P450 superfamily signature | 468 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | P450 superfamily signature | 382 | 393 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | SUPERFAMILY | Cytochrome P450 | 83 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 16 | 513 | IPR050665 | GO:0004497(PANTHER) | |
| Cre10g1652 | 520 | Gene3D | Cytochrome P450 | 27 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1652 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre10g1652 | 520 | FunFam | Cytochrome P450 734A1 | 28 | 520 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2529 | Cre-Chr5:36612990 | Cre10g1652 | Cre-Chr10:30738190 | 1.50E-108 | dispersed | |
| Cre07g0914 | Cre-Chr7:8414179 | Cre10g1652 | Cre-Chr10:30738190 | 9.30E-79 | dispersed | |
| Cre10g1652 | Cre-Chr10:30738190 | Cre11g2120 | Cre-Chr11:32914293 | 1.80E-191 | dispersed | |
| Cre10g1652 | Cre-Chr10:30738190 | Cre11g0766 | Cre-Chr11:4859582 | 2.30E-106 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre10g1652 | - | - | - | 0.0 |