Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1652 ATGATGTGGAATAATTGGATATGGGTGGTGGGTTTATTATGGTTGTTGGGATTATGGGGATGGAGAGTTGTGAATTGGGTTTGGGTTAGGCCGAAAAAGCTTGAGAAGTTCTTGAGACAGCAAGGCCTCGCCGGCAACTCTTATCGCTTTCTCTTGGGGGATACAAAGGAGATTGCGGCGGCCGTCCACCAAGCCAGATCGCAGCCGATGACCTTCTCCCATGATATTGCCCCACGCGCCACCCCTACCTCTCATACCACCATCCACAAATACGGTAAGGATTCTTTCACATGGGTTGGCACAACTCCAAGAGTGTATATAACAGAGCCTGAACAAGTGAAGATTGTTTTTTCTCAAATAAATGATATTCGTAAGACATCTTCTTTTCCCCTTAGACGAAGAGTGGGAAGTGGGCTTGTCTCTCTTGAGGGTTCTAAATGGGCTAAACATAGAAAGATCATCAACCCTGCATTTCACATGGAGAAGTTGAAGGAAATGTTTCCAGCATTCTCCAAGAGTTGTGGAGAGATGGTTAACAAATGGGAAAAGATGATTCCTGAAGAAGGACGTTGTGAAATAGATGTGTGGCCTGATTTGCAAAATATGGCTGCCGATGTGATTTCTAGAACTGCATTTGGAAGTAGTTACGAGGAAGGGGAAAAGATCTTCCAGCTCTTGAAAGAGTGGGCTAAGCTATTGATGACATACCTAACAAAGGGAGCTTATTTCATTCCAGGGTTGAGGTATATGCCAACAAAATTAAACAAGAGAATGGGAGAGATTGATAGGAAAATACGAGATATGGTTTGGGGTATTATAAGCAAAAGACAGAATGCTATGAAGAAAGGTGAAGGTTCCAATAATGAAGATCTATTAGGCATTCTTTTAGAATCAAATGCAAATCAAATTGAAGAACAAAAAAACAAGAAAGATGTTGGAATGAGCATAGAAGAAGTAATAAGTGAATGCAGGCTTTTCTACTTTGCTGGGCAAGAAACCACAGCTGCATTGCTTGCTTGGACAATGGTTCTACTTGGTCGATACTCAGAGTGGCAAGACCGAGCAAGAGCAGAAGTCTTTGAAGTTTTTGGTGATAATAAGAAATGGAATTTTGATGGTCTAAGTCGTCTAAGAGTAGTAACTATGATCCTAAATGAAGTCCTTAGGCTATACCCTCCCGTTGGAATGCTAGCTCGAGAGATTCACAAGGAAACAAAATTGGGAAATGTTACATTACCAGTTGGAGTATCAATAGGAATACCAATATTATCCATACACCATGACCCAAAAATATGGGGTGAAGATGCACTTGAGTTCAAACCAGAAAGATTTTCAGAAGGAATTTCCAAAGCAACAAAGAATCAAGTATGCTTTATCCCTTTTGGATGGGGTCCTCGAATTTGCCTTGGCCAAAACTTTGCGTTGATTGAAGCCAAAATAGCATTATCCATGATTTTGCAACAATTCTCATTCACACTTTCTCCAACTTATACTCATGCTCCTATTGCAAACATCACTATTCAACCACAACATGGGGCTCATCTCGTCCTTCGTAAGCTATAA 1563 41.01 MMWNNWIWVVGLLWLLGLWGWRVVNWVWVRPKKLEKFLRQQGLAGNSYRFLLGDTKEIAAAVHQARSQPMTFSHDIAPRATPTSHTTIHKYGKDSFTWVGTTPRVYITEPEQVKIVFSQINDIRKTSSFPLRRRVGSGLVSLEGSKWAKHRKIINPAFHMEKLKEMFPAFSKSCGEMVNKWEKMIPEEGRCEIDVWPDLQNMAADVISRTAFGSSYEEGEKIFQLLKEWAKLLMTYLTKGAYFIPGLRYMPTKLNKRMGEIDRKIRDMVWGIISKRQNAMKKGEGSNNEDLLGILLESNANQIEEQKNKKDVGMSIEEVISECRLFYFAGQETTAALLAWTMVLLGRYSEWQDRARAEVFEVFGDNKKWNFDGLSRLRVVTMILNEVLRLYPPVGMLAREIHKETKLGNVTLPVGVSIGIPILSIHHDPKIWGEDALEFKPERFSEGISKATKNQVCFIPFGWGPRICLGQNFALIEAKIALSMILQQFSFTLSPTYTHAPIANITIQPQHGAHLVLRKL 520
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 30738190 30742729 + CrPI670011_10g016520.1 Cre10g1652 510954
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1652 520 CDD CYP72 82 516 - -
Cre10g1652 520 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 Pfam Cytochrome P450 89 500 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 SUPERFAMILY Cytochrome P450 83 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 513 IPR050665 GO:0004497(PANTHER)
Cre10g1652 520 Gene3D Cytochrome P450 27 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1652 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre10g1652 520 FunFam Cytochrome P450 734A1 28 520 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2529 Cre-Chr5:36612990 Cre10g1652 Cre-Chr10:30738190 1.50E-108 dispersed
Cre07g0914 Cre-Chr7:8414179 Cre10g1652 Cre-Chr10:30738190 9.30E-79 dispersed
Cre10g1652 Cre-Chr10:30738190 Cre11g2120 Cre-Chr11:32914293 1.80E-191 dispersed
Cre10g1652 Cre-Chr10:30738190 Cre11g0766 Cre-Chr11:4859582 2.30E-106 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1652 - - - 0.0