Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1718 ATGGCGATGCTGGGATCAACGCCATTGTTTGCGACTCAAATGGTGATGTTTTATTGGCCTTGGGAAATCATTTTCCTTTGGCAGATTTTGTTGAGGTCATTGAGGCAACTGCTATGTTTAATGACCTTTCTTGAGCTCTTAAGGCGAAAAGGATCCGATTCTTCGTTTTGGATTACGCTTTCTCTTCTCGAGGAGCTAATGCGAACATCTGACAGAAATCAACACCGCAAACTGTTCCGCATATGGATAAAACAGTCTCCAGAATTCCATTTCCATGTTATTAACAAAAGCTCGAGAAGAATCCACGGCAACCCTCAGGAAGATTGCCAGAGTTTTCTTCGTTTAACTGAGTTTGAAGCTAAGTGCTATGTTCTTAAATCCAACAACCCCTGTAACACCCAAGGATACATAGATTATCTTTACATTTTCTATTGTCAGTATGGAAGTTTTAGCATCCTGGGCTACACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAACACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGCTTGTCAAAATTGTTGAATCTATCCCCAACAATTGCTGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCCAGCCTTGTTGCTTTCATGGGGGATGGAACTAGTGATATTGGCTTGAATACTGTTCTCGGCGGAGCCTCGTTTGTTACCTGCGTCGTCGTTGGAATCATTAGCATTTTGCTGCGTCGGCAATGGATTAAGGTGAATAGGTCTGCCTTCATTCGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTCCTGATATTGCTTCATGGTCATATCAATCTGTGGGGTTCCATTGGCTTTTCTTCCATGTATATTATTTATGTTTTGGTTGTTTATGTCTCCCATGCCCAATGGTTGAGTTTTAGAAGTGAAATCTGCGAACCCCTTTTGAAAGAACCACCAAAGGATGAGTTTGAGGGTCGAAATGAACCACGGGACAACGGTGACGATGATGACAACAATGATGATGTTAGAATTGATGTATATGATCTCTGTTTTTGTCCAAGATTATCACCTTCTTGTCTTTTTTTCCTTCGGATTCTTGAGATTCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGACCATTTGCAATTGCTTCAGTGACATTGGCCCCCCTTCTCTTATCTCTTCTATGGACATTTCACGACCAGAGTGATCAACCGTCGCAATCAAACCTTATCATCTGTGTCATCGCTTCGTTGCTTGGAGTTAGTTTTGGAATTGTTACATTTGCGACGACTGAGAATTCAAGCCCACCAAAGAAGTGCCTGTTCCCTTGGCTTGCAGCTGGCTTCACCATGAGTTTAACATGGAGTTACATTGTAGCTCAGGAACTGGTAGGCCTATTAGTTTCACTTGGCTACATAATGGGTATAAGCCCTTCAATCCTAGGACTTACCTTCCTTGCTTGGGGAAACTCTCTAGGGGATTTGGTTACCAATGTGACCATGGCTTTGAACGGTGGGCAGCGAGGCGCCCAAATCGCCATCTCCGGTTGCTACGCTGGCCCCATCTTCAACACTCTGTTCGGCCTTGGGATATCTCTTGTTGGTGCTTCGTGGAAGAAGTATCCGCAGCCGGTCGCCATCCCTCCCGACCCTTATGTCATGGAGACATTGGGGCTGTTGGTAGGAGGGTTGCTTTGGGCACTTGTGGCTTTGCCAAGGAGAGAGATGAGGCTTGATGCTGTCTTGGGAGGAGGCCTTCTGGCTATCTATTTAACCTCTTTGCTCTTAAGGCTTTTGCAAGCTTTTGGTTCTTCCCATTAG 1869 44.19 MAMLGSTPLFATQMVMFYWPWEIIFLWQILLRSLRQLLCLMTFLELLRRKGSDSSFWITLSLLEELMRTSDRNQHRKLFRIWIKQSPEFHFHVINKSSRRIHGNPQEDCQSFLRLTEFEAKCYVLKSNNPCNTQGYIDYLYIFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDIGLNTVLGGASFVTCVVVGIISILLRRQWIKVNRSAFIRDVLFFLLVLLSVFLILLHGHINLWGSIGFSSMYIIYVLVVYVSHAQWLSFRSEICEPLLKEPPKDEFEGRNEPRDNGDDDDNNDDVRIDVYDLCFCPRLSPSCLFFLRILEIPLYLPRRLTIPAIAEENWSRPFAIASVTLAPLLLSLLWTFHDQSDQPSQSNLIICVIASLLGVSFGIVTFATTENSSPPKKCLFPWLAAGFTMSLTWSYIVAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVTNVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGISLVGASWKKYPQPVAIPPDPYVMETLGLLVGGLLWALVALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFGSSH 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31413763 31418116 - CrPI670011_10g017180.1 Cre10g1718 511020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1718 622 Gene3D - 396 614 IPR044880 -
Cre10g1718 622 Gene3D - 190 316 IPR044880 -
Cre10g1718 622 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 95 620 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Cre10g1718 622 MobiDBLite consensus disorder prediction 325 345 - -
Cre10g1718 622 MobiDBLite consensus disorder prediction 325 343 - -
Cre10g1718 622 Pfam Sodium/calcium exchanger protein 159 303 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cre10g1718 622 Pfam Sodium/calcium exchanger protein 461 614 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1772 Cre-Chr3:34572950 Cre10g1718 Cre-Chr10:31413763 1.60E-112 dispersed
Cre03g1954 Cre-Chr3:36606126 Cre10g1718 Cre-Chr10:31413763 3.10E-48 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1718 K13754 - csv:101204766 915.99