Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g1736 | ATGGTTATGGCTGACGATTCCCAATTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGAAAACTCATCGAAAGGCTTCTCAAAACCTCCTCCTATCAAGTTACTACGGTTGATTCTGGTAGCAAGGCCTTGGAATTTCTAGGTCTGATTCAAGAACATCAACATACAAACTTCAAATCCCCTTCTCCTTCTCCTTCTTTTTCCTCCTCCAACAATCATCACCAGGAAGTGGAAGTGAATCTTATCATCACTGATTACTGTATGCCTGGAATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGAATCAACGTCGCTTAGAAACATACCAGTGGTGATAATGTCATCGGAAAACGTACCTTCGAGAATCAGCAGATGTTTGGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCATATGATGAAGACGAAGTTGATGGAGGATCAAAATCAAGAAGAAGAAGAAACAACAGCAACAGAGATCGAATTGGAATCGGTAGAAAAAGAAGAAGAAGAAGAAGAGTTTGAGTTTGAGATGAGTAAGAAGAGAAAGGGAGGTGTGGATGAAGAAAGTGTGGAGACGGAGAGAAGAAGAAGAAGAAGAAGGTTCGACAACAATGGCGTCGCGACGCCGATCAAACACACACACACAAAAAGCAAAAAAACAAAGCCTTTCTTCATTGATCAATACAAAACCTTCTTCTTTACAACTCCCAAATCAAAATTCCCTTCTCCATTTTCCCTCAATTTCTTCCTCTTAATCAACCTTCCCTCCAATTTCTTCTCTCCTTCTTCATTCCGATTCAGCGCATAA | 849 | 41.34 | MVMADDSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQHTNFKSPSPSPSFSSSNNHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHMMKTKLMEDQNQEEEETTATEIELESVEKEEEEEEFEFEMSKKRKGGVDEESVETERRRRRRRFDNNGVATPIKHTHTKSKKTKPFFIDQYKTFFFTTPKSKFPSPFSLNFFLLINLPSNFFSPSSFRFSA | 282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 31659739 | 31667735 | - | CrPI670011_10g017360.1 | Cre10g1736 | 511038 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g1736 | 282 | Pfam | Response regulator receiver domain | 74 | 142 | IPR001789 | GO:0000160(InterPro) | |
Cre10g1736 | 282 | SMART | REC_2 | 9 | 148 | IPR001789 | GO:0000160(InterPro) | |
Cre10g1736 | 282 | MobiDBLite | consensus disorder prediction | 158 | 214 | - | - | |
Cre10g1736 | 282 | Gene3D | - | 10 | 232 | - | - | |
Cre10g1736 | 282 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 6 | 213 | IPR045279 | GO:0009736(InterPro) | |
Cre10g1736 | 282 | CDD | REC_typeA_ARR | 11 | 148 | - | - | |
Cre10g1736 | 282 | MobiDBLite | consensus disorder prediction | 187 | 214 | - | - | |
Cre10g1736 | 282 | Coils | Coil | 161 | 181 | - | - | |
Cre10g1736 | 282 | MobiDBLite | consensus disorder prediction | 164 | 186 | - | - | |
Cre10g1736 | 282 | ProSiteProfiles | Response regulatory domain profile. | 10 | 153 | IPR001789 | GO:0000160(InterPro) | |
Cre10g1736 | 282 | SUPERFAMILY | CheY-like | 8 | 165 | IPR011006 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g0540 | Cre-Chr4:21041581 | Cre10g1736 | Cre-Chr10:31659739 | 6.10E-55 | dispersed | |
Cre06g2534 | Cre-Chr6:32991425 | Cre10g1736 | Cre-Chr10:31659739 | 9.00E-39 | dispersed | |
Cre07g0902 | Cre-Chr7:8148361 | Cre10g1736 | Cre-Chr10:31659739 | 4.20E-40 | dispersed | |
Cre09g1785 | Cre-Chr9:36276213 | Cre10g1736 | Cre-Chr10:31659739 | 1.10E-51 | dispersed | |
Cre10g1736 | Cre-Chr10:31659739 | Cre05g2664 | Cre-Chr5:37620159 | 1.30E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54565 | PF00072 | Response_reg | 3.90E-13 | CL0304 | Cre | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g1736 | K14492 | - | csv:101220810 | 303.523 |