Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1762 ATGGGATTCTTAGAATGCCTTGGCCATTTCTTTCAAAATGCAAAGCCTTACATCGCAGTCATCTCCCTCCAATTCGGCTATGCCGGAATGAATATCATCTCCACCGTCTCCCTCAACCGGGGTATGAGCCACTACGTCCTCGTTGTCTACCGCCACGCCTTTGCCACCGCCGTCATGGCACCCTTTGCTCTTGTTCTCGAGAGGAAAGTAAGACCCAAGATTACATTTAAGATTTTCATTCAGATGTTTGTTCTTGCTCTACTTGGGCCACTGATTGATCAAAACTTCTACTATGTGGGGCTGAAAATGACATCCCCAACTTTCTCTTGTGCCATAAGCAACATGCTTCCTTCAATGACATTTGTGATGGCAGTCATTTGCAGGATGGAGAAGTTGGATTTGAAAAGAGTGAGATGCCAAGCAAAGTTGTTTGGAACAGTAATGACGGTAGTGGGAGCCATGTTGATGACATTTTACAAAGGAAGTGTCATCAACTTCTTCTGGACCGGGCACGGCCACCAACCGCACGCACCACCTACTGCAGATGCGGCAGCACTCAACCACCACAACGACGGAGAGTTCATCAAAGGCTCAATCTTGCTCATCATCGCCACTCTGGCTTGGGCAGCCTTCTTCATTCTCCAAGTCATAACTTTGAGAAAATACACCGCTCATCTTTCTCTCACCACTTTGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGTCACCCTTGCTATGGAGCACCAGCCCTCTGCCTGGGCTATCGGCTGGGACTTGAACCTTCTTGCCGCCGCATATGCAGGGATTGTGACTTCAGGGGTGGCATATTATGTTCAAGGTTTGGTTATGAAGACAAAGGGGCCAGTTTTTGTAACAGCTTTTAGCCCTTTGATGATGGTGATTGTTGCTTTCATGGGATCTCTCATCTTGGCTGAAAAGATTTATGTTGGAGGGATAATTGGAGCAGTGTTGATTGTGATAGGGTTGTACTCTGTTTTGTGGGGAAAGTACAAAGAAAGCAAAGAGAAAGAAGTTGAAGAGATTGTTGAATTAGCAATGAAAGGTGGAGATCAATTGCCTGTAATAAATGAAGGCATTGAAACAATTCAAAAGAAAGAGGGTTTGGCCATTACTATTCCACCCCAAGCTCATGGAGAAGAGGCTTCAAGACACTAA 1179 45.72 MGFLECLGHFFQNAKPYIAVISLQFGYAGMNIISTVSLNRGMSHYVLVVYRHAFATAVMAPFALVLERKVRPKITFKIFIQMFVLALLGPLIDQNFYYVGLKMTSPTFSCAISNMLPSMTFVMAVICRMEKLDLKRVRCQAKLFGTVMTVVGAMLMTFYKGSVINFFWTGHGHQPHAPPTADAAALNHHNDGEFIKGSILLIIATLAWAAFFILQVITLRKYTAHLSLTTLVCFLGTLQAIVVTLAMEHQPSAWAIGWDLNLLAAAYAGIVTSGVAYYVQGLVMKTKGPVFVTAFSPLMMVIVAFMGSLILAEKIYVGGIIGAVLIVIGLYSVLWGKYKESKEKEVEEIVELAMKGGDQLPVINEGIETIQKKEGLAITIPPQAHGEEASRH 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32014096 32016373 - CrPI670011_10g017620.1 Cre10g1762 511064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1762 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 338 - -
Cre10g1762 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Cre10g1762 392 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020(InterPro)
Cre10g1762 392 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020(InterPro)
Cre10g1762 392 PANTHER WAT1-RELATED PROTEIN 18 346 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0633 Cre-Chr4:23822504 Cre10g1762 Cre-Chr10:32014096 6.30E-126 dispersed
Cre06g1858 Cre-Chr6:24434787 Cre10g1762 Cre-Chr10:32014096 4.10E-60 dispersed
Cre08g0513 Cre-Chr8:17683883 Cre10g1762 Cre-Chr10:32014096 8.20E-93 dispersed
Cre08g1412 Cre-Chr8:27110485 Cre10g1762 Cre-Chr10:32014096 1.20E-62 dispersed
Cre10g1762 Cre-Chr10:32014096 Cre11g1745 Cre-Chr11:29068755 2.20E-125 dispersed
Cre10g1761 Cre-Chr10:32009258 Cre10g1762 Cre-Chr10:32014096 5.20E-28 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1762 - - - 0.0