Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre10g1763 | ATGGATATCTCTATTCCGGCGACTTTCTTCCTCACTTTCCTGATCTCTCTTTTCCTTTTCCTTTACTTCTTATCTTCAACGAAGAAATCTCAAAGCCATGAAGGTTTTAAAAACTACCCCATCGTCGGAGTATTGCCCCTGTTCTTATTAAACCGCCACCGTTTTCTGGACTGGACGACGGAGGTCCTCCGCAACTGCAAGACCAACACAGCGGTGATCCGGCGGCCAGGGGACGTCTGCGGCGTTATGACGGCAAACCCACTTGTGGTAGAGCACATTCTGAAGACCCAATTTAAGAATTACCCAAAAGGGGAACGTTTGCTTTCGATTTTGGAGGATTTTTTGGGGAGTGGGATTTTCAATTCCGACGGCGAAATTTGGAGATTTCAAAGGAAAATGGCGAGTTATGAGTTCAATACGAAATCGCTGAGGAATTTTGTTATGGAGAATGTTAAAGTTGAGATACAGAGGAAGTTGATTCCTGTTTTGGAGAAGGCGGCTTCGTCGTCTGAAACAGAGTGTGTTTTGGATTTGCAAAATGTTTTTGAGCGATTTGCGTTTGATAATGTTTGTAAATTGTCTTTCAATTTTGATTCCGGTTGTCTCGGCGGCGAGGATAACGCCGGCACCGACTTCATGCGCGCTTTTGAGACCGCCGCCACCCTCACATCCGGCAGGTTTAGGTATGCTATCCCTCATTGGTACAAGGTGAAGAGATTTTTCAACTTGGGATCAGAAAGAAACCTAAAGAAATCCATATCAATTGTTCACAAATTTGCAGATGAAATTATACGCTCAAGAATGGAAGAGAAAACAACCCAAAATAAGGATCAAGATTTATTGTCACGATTCATGGCAAACGAAGATAATTCCCCAAAATTCCTACGAGACATAATCATAAGCTTTATCCTCGCCGGTGGAGACACCACTTCTTCAGCTCTAACATGGTTCTTTTGGATCTTATCCTCCCGACCTGATATCGAACAAAACATCCTTGCAGAACTTGAAAAGATAAGATCAAGAACACGTAAGGAAATCGGAGAAATGTATAGCTTCGACGAACTCCAAGACATGCACTATCTTCAAGCAGCATTGTCCGAGACTCTCCGGTTATACCCCCCAGTCCCGATTGACTCAAAAGCTTGCCAACGTGACGATATCTTACCCGATGGGACGTTTATTAGGAAGAGTTGGTTTATGATGTACCATGCATATGCAATGGGAAGAATGAAGAGCATATGGGGGGAGAATTGTGAGGAAGTTTTGCCAGAAAGGTGGTTAGAAAATGGGGTTTGTAGGATTGAGAGTCCATTTCAGTTTCCTATATTTCATGGAGGGCCAAGGATGTGTCCAGGAAAAGATATGGCTTATATTCAGATCAAGTCCATAGTTGCAGCTGTGATCCAGAAGTTTGAAGTAAAAATGGTAGAAAAGAAGACTCCAAAGCATTTGTTATCACTGACATTAAGGATGGAGAATGGTTTGCAAGTGATGGTAAAAAAGAGGCCCATATATAACGTAAATTAG | 1527 | 42.63 | MDISIPATFFLTFLISLFLFLYFLSSTKKSQSHEGFKNYPIVGVLPLFLLNRHRFLDWTTEVLRNCKTNTAVIRRPGDVCGVMTANPLVVEHILKTQFKNYPKGERLLSILEDFLGSGIFNSDGEIWRFQRKMASYEFNTKSLRNFVMENVKVEIQRKLIPVLEKAASSSETECVLDLQNVFERFAFDNVCKLSFNFDSGCLGGEDNAGTDFMRAFETAATLTSGRFRYAIPHWYKVKRFFNLGSERNLKKSISIVHKFADEIIRSRMEEKTTQNKDQDLLSRFMANEDNSPKFLRDIIISFILAGGDTTSSALTWFFWILSSRPDIEQNILAELEKIRSRTRKEIGEMYSFDELQDMHYLQAALSETLRLYPPVPIDSKACQRDDILPDGTFIRKSWFMMYHAYAMGRMKSIWGENCEEVLPERWLENGVCRIESPFQFPIFHGGPRMCPGKDMAYIQIKSIVAAVIQKFEVKMVEKKTPKHLLSLTLRMENGLQVMVKKRPIYNVN | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 32034241 | 32036930 | + | CrPI670011_10g017630.1 | Cre10g1763 | 511065 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre10g1763 | 508 | CDD | CYP86A | 70 | 495 | - | - | |
| Cre10g1763 | 508 | Gene3D | Cytochrome P450 | 31 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | Pfam | Cytochrome P450 | 82 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PANTHER | CYTOCHROME P450 | 21 | 495 | - | - | |
| Cre10g1763 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre10g1763 | 508 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1763 | 508 | SUPERFAMILY | Cytochrome P450 | 36 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre10g1763 | Cre-Chr10:32034241 | Cre10g2027 | Cre-Chr10:34913861 | 1.20E-102 | dispersed | |
| Cre10g1763 | Cre-Chr10:32034241 | Cre10g1764 | Cre-Chr10:32039833 | 1.50E-222 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre10g1763 | - | - | - | 0.0 |