Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre10g1764 | ATGGATATCTCTGTTCTATCTGTTCTAACACTAACACCCTTCATTTTCCTCACTTTTCTTTCTCTTTCCCTTTACCTTCTCTTCTTCACTTCACCAAACACCAAATCCAAACCCCACCAAGGTTTCAAACACTTCCCCCTCGTCGGAACCTTGCCGCTCTTCTTATTAAACCGCCACCGTTTTCTTGACTGGTCTACAGAGGTTCTCAAAAACTGCCGGACGAACACGGCGGTGTTCAAGCGGCCAGGGAAAGTACACGGCGTAATCACCGCGAACCCACTTGTGGTTGAGCATATACTGAAGACCCAATTTGAGAATTACCCAAAAGGGGAAAGATTCATTTCGCTTTTGGAAGATTTCTTGGGGCGAGGAATTTTCAATTCCGACGGCGAAATTTGGAAAGTGCAGAGGAAAACGGCGAGTTATGAATTCAATACGAAATCGTTAAGGAATTTTGTTATGGAGAATGTTAGAGTTGAGGTTCAGAGTAGGCTGTTGCCTATTTTTGGAAAAGCTTCTGAAACGGAGCGGATTTTGGATCTACAGGACGTTTTGGAACGGTTTGCGTTTGATAATGTTTGTAAATTGGCTTTTAATTATGATCCTGCTTGTCTCGGCGGCGATGGCACCGCCGCCGCCGAGTTCATGCGCGCTTTTGAGGACGCCGCCACTCTCAGCTCCGGAAGATTCATGTATGCTTTCCCAGGTTTGTACAAAGTGAAGAAATTTTTAAACATAGGATCAGAAAGAACCCTGAAGGAATCAATAGCCATAGTTCACAAATTTGCAGATGACATCATCACCTCAAGAATGGAAGAGAAGAAGAGAACCCAAATAGAAAAAGATCAAGATTTATTATCTCGATTCATGGGAGACGAAAACAATTCTCCAGAATTCCTTCGAGACATAATCATAAGTTTCATCCTTGCGGGGCGAGACACCACTTCATCAGCTCTAACATGGTTTTTCTGGATTTTATCGTCACGACCCGATGTTGAACAAAAAATCCTAACAGAACTCCAAACAATCCGATCAAGAACACATAAGGAAATCGGAGAAATGTATAGCTTCGACCAACTTCGAGATATGCACTATCTACAAGCAGCATTATCCGAGACACTCCGCCTATATCCACCGGTGCCAGTGGATACAAAAGCTTGTCGAAACGATGACGTCTTACCCGATGGGACGTTTATCGGGAAGAGTTGGTTCGTGACGTACCATACATATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGAATTATGGAGAATTTTCACCGGAAAGGTGGCTACAGAATGGGGTTTGTAAGACGGAGAGTCCGTTTCGTTTCCCGATATTTCACGCGGGACCGAGGATGTGTTTAGGAAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCAGCTGTGATTGAGAAGTTTGAAGTGGAAATGGTGGAGAAGAAGAAAACTCCAAAGCATTTGTTGTCTTTAACATTGAGGATGGAGAATGGGTTACAAGTGATGGTCAAAAAGAGAGATAGGAGTATGCCCATTTGA | 1545 | 43.69 | MDISVLSVLTLTPFIFLTFLSLSLYLLFFTSPNTKSKPHQGFKHFPLVGTLPLFLLNRHRFLDWSTEVLKNCRTNTAVFKRPGKVHGVITANPLVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVRVEVQSRLLPIFGKASETERILDLQDVLERFAFDNVCKLAFNYDPACLGGDGTAAAEFMRAFEDAATLSSGRFMYAFPGLYKVKKFLNIGSERTLKESIAIVHKFADDIITSRMEEKKRTQIEKDQDLLSRFMGDENNSPEFLRDIIISFILAGRDTTSSALTWFFWILSSRPDVEQKILTELQTIRSRTHKEIGEMYSFDQLRDMHYLQAALSETLRLYPPVPVDTKACRNDDVLPDGTFIGKSWFVTYHTYAMGRMESIWGKNYGEFSPERWLQNGVCKTESPFRFPIFHAGPRMCLGKDMAYIQMKSIAAAVIEKFEVEMVEKKKTPKHLLSLTLRMENGLQVMVKKRDRSMPI | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 32039833 | 32041749 | + | CrPI670011_10g017640.1 | Cre10g1764 | 511066 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre10g1764 | 514 | SUPERFAMILY | Cytochrome P450 | 38 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | Gene3D | Cytochrome P450 | 29 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre10g1764 | 514 | PANTHER | CYTOCHROME P450 | 24 | 501 | - | - | |
| Cre10g1764 | 514 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | Pfam | Cytochrome P450 | 81 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1764 | 514 | CDD | CYP86A | 76 | 501 | - | - | |
| Cre10g1764 | 514 | FunFam | Cytochrome P450 | 33 | 511 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g0288 | Cre-Chr5:2635501 | Cre10g1764 | Cre-Chr10:32039833 | 1.30E-90 | dispersed | |
| Cre06g2639 | Cre-Chr6:33995642 | Cre10g1764 | Cre-Chr10:32039833 | 1.10E-111 | dispersed | |
| Cre07g0443 | Cre-Chr7:2143214 | Cre10g1764 | Cre-Chr10:32039833 | 2.80E-120 | dispersed | |
| Cre10g1354 | Cre-Chr10:27166399 | Cre10g1764 | Cre-Chr10:32039833 | 1.40E-101 | dispersed | |
| Cre10g1764 | Cre-Chr10:32039833 | Cre10g2027 | Cre-Chr10:34913861 | 1.70E-109 | dispersed | |
| Cre10g1763 | Cre-Chr10:32034241 | Cre10g1764 | Cre-Chr10:32039833 | 1.50E-222 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre10g1764 | - | - | - | 0.0 |