Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre10g1847 | ATGGCTAATCCAGACTACCTTCTTCTTCTCTCTCTCTTGTTGACCTCCTTTCTCTTTGTTCAAGTCATCTTCACTCGAACCCGACCCGACAGGCTTCGTCGTCCACCGAGCCCTCCGTCGTGGCCGGTGGTCGGCCACCTCCACCTCCTTGGTAGAATCCCTCACCAAGCCTTTCACAAACTGTCATGTCAATATGGACCATTAATGCATCTCTTCCTAGGCTCTAAGCCTTGTGTTATTGTCTCCAATTCAGAAATGGCTAAACAATTCCTCAAAACTAATGAATCCTTCTTTCTTAACCGACCCATTAGACTCAACATAAACTATCTCACTTATGGCTCTGCGGACTTCACTTTTGCACCCTATGGACCCTATTGGAAGTTCTTGAAAAAGCTTTGCATGACAGAGCTCCTCGGTGGTCGGACCCTCGACCTCCACCGCCCGATAAGGGACGAGGAGATGAGGTTGTTTGTGCAAAGGATTCATGAACAGGCTATTGTAGGGAAGATGGTTGATGTTGGAGCTGAGCTTTCAAGGTTGATGAACAACATAATATCGAGGATGGCACTGAGGAGACGATGCTCGGAGAAGGAAGATGGATCAGAAGAGGTCGGGAAGCTGGTGGGGGAGATGTGCGAGCTGGCTGGAGAACTTAACATCGCCGATATGATTTGGTTCTGCAAGGGATTGGATCTACAAGGGTTTCGGAGACGAGTTAAAGATGTGAGAAATAGGTATGATATAATGATGGAGAAGATATTAAAAGAGCATGAACAACACGGGAAGAGGAAGAAAGATGATGGAGTTAAGGATTTTCTTGATGTCTTACTTCACATTTATGAAGATAAAACCTCACAAATCAAACTCACAAGAGAGAATATTAAGGCTTTTGTTATGAACATATTCGGCGCCGGAACTGAAACATCAGCCGCGGCGACAGAGTGGGCATTAGCGGAGCTAATTAACAACCCATCCGCCATGGCCAAAGCAACTCAAGAACTCGACTCCATCACCGGAAAAACCCGTCTCCTTCACGAATCCGATCTCCCCAATCTCCCCTATCTCCAAGCCGTCGTCAAAGAGACTCTCCGCCTCCACCCGACGGCGCCGCTTATCGTCCGGGAGGCCACCGAGTCCTGCACCGTCGCCGGCTACCACATTCCAGCCAAGACCCGCCTGCTCGTCAATGTCTGGTCCATAGCCCGCGACCCGACCCACTGGCTTGATCCGAACCGGTTCGACCCGGATCGGTTCTTGAACCACCCACCCGGTTCCGACCTGCAGAGCTTTGATCTTATGCCGTTTGGAAGTGGTCGTCGGAGCTGCCCCGGCGCAGCCCTGGCGCTGGTGGCGGTGCCGGCGGTTCTCGGGAGGTTAATTCAGTGCTTTGAGTGGAGGGTTGACGGCGGCAGCGGCATTGATATGGAAGAAGGGCCGGGAATCTCTCTCCGGCGAGCTCGTCCGTTGGTTCTAATACCAGTGCCTAGGCTTCATCCTTTTCCTTCTATTTAG | 1512 | 50.99 | MANPDYLLLLSLLLTSFLFVQVIFTRTRPDRLRRPPSPPSWPVVGHLHLLGRIPHQAFHKLSCQYGPLMHLFLGSKPCVIVSNSEMAKQFLKTNESFFLNRPIRLNINYLTYGSADFTFAPYGPYWKFLKKLCMTELLGGRTLDLHRPIRDEEMRLFVQRIHEQAIVGKMVDVGAELSRLMNNIISRMALRRRCSEKEDGSEEVGKLVGEMCELAGELNIADMIWFCKGLDLQGFRRRVKDVRNRYDIMMEKILKEHEQHGKRKKDDGVKDFLDVLLHIYEDKTSQIKLTRENIKAFVMNIFGAGTETSAAATEWALAELINNPSAMAKATQELDSITGKTRLLHESDLPNLPYLQAVVKETLRLHPTAPLIVREATESCTVAGYHIPAKTRLLVNVWSIARDPTHWLDPNRFDPDRFLNHPPGSDLQSFDLMPFGSGRRSCPGAALALVAVPAVLGRLIQCFEWRVDGGSGIDMEEGPGISLRRARPLVLIPVPRLHPFPSI | 503 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 33044805 | 33047819 | - | CrPI670011_10g018470.1 | Cre10g1847 | 511149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre10g1847 | 503 | SUPERFAMILY | Cytochrome P450 | 35 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre10g1847 | 503 | Gene3D | Cytochrome P450 | 20 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | CDD | CYP93 | 66 | 493 | - | - | |
| Cre10g1847 | 503 | PRINTS | E-class P450 group I signature | 396 | 420 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | Pfam | Cytochrome P450 | 35 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | P450 superfamily signature | 442 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g1847 | 503 | FunFam | Cytochrome P450 family protein | 26 | 491 | - | - | |
| Cre10g1847 | 503 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 14 | 496 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre04g0101 | Cre-Chr4:2256003 | Cre10g1847 | Cre-Chr10:33044805 | 2.30E-167 | dispersed | |
| Cre07g1816 | Cre-Chr7:33543150 | Cre10g1847 | Cre-Chr10:33044805 | 3.20E-102 | dispersed | |
| Cre08g1574 | Cre-Chr8:28319998 | Cre10g1847 | Cre-Chr10:33044805 | 9.70E-81 | dispersed | |
| Cre10g1847 | Cre-Chr10:33044805 | Cre10g2057 | Cre-Chr10:35268139 | 4.80E-77 | dispersed | |
| Cre10g1847 | Cre-Chr10:33044805 | Cre10g1848 | Cre-Chr10:33052223 | 8.50E-106 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre10g1847 | K24188 | - | csv:101205411 | 811.601 |