Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1848 ATGAAGGCCATGACCTCCATCTTTGACAACACCACCTCTCCCCTTCAATTTTGGTGCTTCTGCTTCATCACTTCCATCCTCCTCTATCTCTTCCTCAAAAAACATCTCCCAAACCCTAAACCCTCATCTCCTGGCACCCCCGCGCCACCCCCGAGCCCACCGACCCTCCCTCTCATCGGCCATCTCCATCTCCTCACACCAGTCCTAGTCACCTCATTCCAAACCCTAGCTCGCCGTTATGGCCCCCTCATCGAGCTCCGACTCGGCTCTTCAAAGTGTGTCGTCGTCTCAACCGCTGCAGTTGCGAAAGAGGTTCTAAAAACTCACGAACACAACTTCCTCTCCCGACCGGAGTTCGGTGCCTCCGAGTACTTCATTTACCGAGGGTCAAAATTCGTCATGGCCCAATACGGACCCTATTGGCGATACATGAAGAAGCTAACCATGACACGACTTCTCTCGCCACCGCAGCTAGCGGTCTCAACCGCCATTCGCAGTGAAGAGGTGGCAAAACTTGTGGAAAGAATAGAGGCAAATTCAAGGGAAAATAAACCCTCAGATTTGAGATTGGAGTTTACTACTTTGACAAACAATATCATATCAAGGATGGTTTTGAGCACAAGTTGCTGTGGAGGGAAAGATGAGGCTGAAGAGATTAAGGATTTGGTGTGGAGGATCAATATGTTGGCTGGGAAGTTGAGTTTGGGGGATATTTTGGGACCTTTGAAAGTGTTTGATTTCTCTGGAAATGGAAAGAAGTTTGTGAAAACTTTGAAGAGATTCGATGGGTTGGTAGAGAGGATAATGAAGGAGCATGAAGCTGCCAATAATGGTGGTGGGGATGCTGAAACAAAAAGAGATTTGTTGGATATCTTGTTGGAGATTTACAAAGATCCAAATGCTGAGATGAAGATAACTAGAAACGATGTCAAGTCGTTCTTGCTTGACCTTTTCATGGCCGGCACCGACACAACGGCAACAGCAGTGCTATGGGCAATGGGAGAGCTTCTAAATCGTCCAGAATCAATGAAAAAGCTAAGAAAAGAGATAATATCTGTGGTTGGAAAGAAGAAGCAAGTCCAAGAATGTGACCTCCCCAACCTCCCATATCTCGGAGCAGTGATGAAGGAAACACTCCGTCTCCACCCGTCGGCACCAATCATCATGAGGGAATGTTTAGATGAGTGTAACATCAATGGCTCACAAATCAAGGCCAAAACTCGGGTGTTGGTCAACGCATACGCCGTCATGAGAGACCCAGAGTGTTGGTCAGAGCCGGACAGGTTCTTACCGGAGAGGTTTTTGGAAGGCTCCCACGAGAATATTGGTGGTCATCGGATGGAGATGAAAGGCCAGAATTTTCGTTACATTCCATTTGGGAGTGGAAAGAGAGGTTGCCCTGGATCTTCCCTTGCGTTGTTAGTTTTTCCATGTGCAATTGCGACCATGGTGCAACGATTTGATTGGAACATAGGTGGACACCACGGCAACAACGTTGATTTGACACTTGGCTCAGGATTTGCTGCAGAGATGGCGATGCCGCTCGTCTGTTATGCAGCCCCCATTGATGGGAGTGGTTAA 1581 47.88 MKAMTSIFDNTTSPLQFWCFCFITSILLYLFLKKHLPNPKPSSPGTPAPPPSPPTLPLIGHLHLLTPVLVTSFQTLARRYGPLIELRLGSSKCVVVSTAAVAKEVLKTHEHNFLSRPEFGASEYFIYRGSKFVMAQYGPYWRYMKKLTMTRLLSPPQLAVSTAIRSEEVAKLVERIEANSRENKPSDLRLEFTTLTNNIISRMVLSTSCCGGKDEAEEIKDLVWRINMLAGKLSLGDILGPLKVFDFSGNGKKFVKTLKRFDGLVERIMKEHEAANNGGGDAETKRDLLDILLEIYKDPNAEMKITRNDVKSFLLDLFMAGTDTTATAVLWAMGELLNRPESMKKLRKEIISVVGKKKQVQECDLPNLPYLGAVMKETLRLHPSAPIIMRECLDECNINGSQIKAKTRVLVNAYAVMRDPECWSEPDRFLPERFLEGSHENIGGHRMEMKGQNFRYIPFGSGKRGCPGSSLALLVFPCAIATMVQRFDWNIGGHHGNNVDLTLGSGFAAEMAMPLVCYAAPIDGSG 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33052223 33054684 - CrPI670011_10g018480.1 Cre10g1848 511150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1848 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre10g1848 526 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 Gene3D Cytochrome P450 44 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 Pfam Cytochrome P450 50 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 FunFam Cytochrome P450 family protein 42 517 - -
Cre10g1848 526 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 SUPERFAMILY Cytochrome P450 48 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre10g1848 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 25 519 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g1403 Cre-Chr10:27725864 Cre10g1848 Cre-Chr10:33052223 4.20E-116 dispersed
Cre10g1404 Cre-Chr10:27734499 Cre10g1848 Cre-Chr10:33052223 2.80E-112 dispersed
Cre10g1848 Cre-Chr10:33052223 Cre04g1533 Cre-Chr4:33982645 3.60E-75 dispersed
Cre10g1847 Cre-Chr10:33044805 Cre10g1848 Cre-Chr10:33052223 8.50E-106 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1848 - - - 0.0