Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g1868 ATGGAAATCGACTCACTGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACATACAGGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCACATTTACCTGTTTGCACTGTATTGGGATTAGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGCCTACAAGCACATGAAACTTAAACCCACCATTCTGGACGAGTATTCAAAGGAGAGATCTGCCACCCCCCTTGTTAAGCCACACAACTTTATGCACCCAGATGATCATCTAATATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTATATGTTACAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGCGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTTCTTGTTGATCATATAACAGGACATTTAGGGGACGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTAATGTTGTCATTTGTGGGAATTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCGAAGGACCAAACAAAGCTGATGGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGGTCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTCCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGCAAGTCAATAATGTCAGCCTGATAGAGTTTCTTGGAACATCAGGACAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGTTGCTACCCATTCACTGATCGGGATCCTTTCCTAATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAATTTTGATACTCGCTTAATAAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCAATTCCAAGATTTTGCGAGAAGGGGGTTGCCGTAGTGGAAACTGATTATCTAAAATTACCTGCTTCTAAGAAAGTGAAGCAATGTGGCATCTGA 1344 43.23 MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPHLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLILEDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVNVVICGNSVEIPRGILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRQVNNVSLIEFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDNFDTRLIKGAEGQMVRLIAIPRFCEKGVAVVETDYLKLPASKKVKQCGI 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33264486 33270664 + CrPI670011_10g018680.1 Cre10g1868 511170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g1868 447 Pfam DNA polymerase alpha/epsilon subunit B 182 401 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Cre10g1868 447 Gene3D - 40 164 - -
Cre10g1868 447 FunFam DNA polymerase delta small subunit 169 439 - -
Cre10g1868 447 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Cre10g1868 447 Gene3D - 169 437 - -
Cre10g1868 447 CDD MPP_PolD2_C 181 429 IPR041863 -
Cre10g1868 447 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 7 429 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g1868 K02328 - csv:101221438 810.446