Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre10g2027 | ATGGAAATTTTCTTTCTTCTTCACCCAATTGTTTTCCTTTTATTTTTCCTTCTATTTCTCTCTATAATCATCTTCCTATTGAAGCCTAAATTTCTGTGCCACTGTGAAATTTGCCAAGCTTATTTGTCCTCATCTTGGTCCAAAGATTTCTTTAACCTCTGTGATTGGTATTCCCATCTTCTCCGGCAGTCTCCGACGAAGACCATTCACATCCACGTTCTGAAGAACACGATTACGGCGAATCCAGACAACGTGGAATACATTCTCAAGACGAAATTTGAAAATTACCCAAAAGGGAAAATCTTCTCCTCGATTCTTGGCGATTTTTTGGGCCGTGGGATTTTCAATGTCGATGGGGATTTGTGGAGGTTTCAGAAGAAAATGGCGATCCTCGAACTTGGTCAACAGTCGATTAGATCTTACTGTTTTGAAATTGTTTCTCAGGAGATTCATTCCCGGCTTTTGCCGCTTCTTTCGTCGGTTGCCGACGGCGGAGTTTTGGATTTGCAGGATGTGTTTAGGAGATTTGCTTTTGATAGTATTTGTAAGTTTTCATTTGGGTTGGATCCAATGTGCTTGGAGCTGTCTCTTCCGATGTCCGAATTTGCCGTCGCTTTCGATCTTGCTTCTAAGCTTTCTGCTGAAAGAGCCATGGCGGTCCCGCCGTTGATCTGGAAAATCAAGCGAATGCTCAACTTAGGGAATGAGAGAGAGTTGAAAAAAGCAATAAAACTAATAAACATGTTGGCTCATGAAGTAATTCGACAGAGAAGAAAATTGGGATTCTCAACCCATAGGGACCTCCTTTCTCAATTCATGCGAACCGTGTCTGACGAAACTTTCTTACGAGACATTGTTGTGAGCTTTCTTTTAGCCGGTCGCGATACCATTGCCTCTGCTCTCACCAGCTTCTTCTGGGTTCTTTCCAATCATCCTACCGTAGAGTCTGCTATCCAACTTGAGGCAGACCGAATCATTGGTCCCAACTCAAACCCTACATCCTTCGACCAAATACGAAACCTCCACTACTTACAAGCCGCTATTTTTGAGTCCATGAGGCTCTATCCTCCCATTCAGTTTGACTCCAAGTTTTGCCAGAATGACGATGTTTTACCCGATGGGACTTTTGTTGGACGTGGTACTCGAGTTACTTACCATCCCTATGCTATGGGTCGAGTTGAGCAAAATTGGGGTCCAAATTGCCTGGAGTTCAAACCCGAACGGTGGCTGAAAAACGACATATTCTGCCCCGAGAACCCTTTCAAGTACCCAATTTTTCAAGGTGGTTTTCGGTTTTGTTTAGGCAAAGAAATGGCTCTTGCTGAATTGAAAATTGTAGCACTTTCCCTTATTCGTCATTTTCAAATCCAGTCCGCGACACCAGGTGTGACACCACGATTCTCCCCTGGCCTCACTGCAACCTTTTGTGGTGGATTCCAAGTTTCCATTAGTAAGAAGAAGAAATCGAATTGA | 1473 | 43.45 | MEIFFLLHPIVFLLFFLLFLSIIIFLLKPKFLCHCEICQAYLSSSWSKDFFNLCDWYSHLLRQSPTKTIHIHVLKNTITANPDNVEYILKTKFENYPKGKIFSSILGDFLGRGIFNVDGDLWRFQKKMAILELGQQSIRSYCFEIVSQEIHSRLLPLLSSVADGGVLDLQDVFRRFAFDSICKFSFGLDPMCLELSLPMSEFAVAFDLASKLSAERAMAVPPLIWKIKRMLNLGNERELKKAIKLINMLAHEVIRQRRKLGFSTHRDLLSQFMRTVSDETFLRDIVVSFLLAGRDTIASALTSFFWVLSNHPTVESAIQLEADRIIGPNSNPTSFDQIRNLHYLQAAIFESMRLYPPIQFDSKFCQNDDVLPDGTFVGRGTRVTYHPYAMGRVEQNWGPNCLEFKPERWLKNDIFCPENPFKYPIFQGGFRFCLGKEMALAELKIVALSLIRHFQIQSATPGVTPRFSPGLTATFCGGFQVSISKKKKSN | 490 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 34913861 | 34916398 | + | CrPI670011_10g020270.1 | Cre10g2027 | 511329 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre10g2027 | 490 | PRINTS | E-class P450 group I signature | 423 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | PRINTS | E-class P450 group I signature | 281 | 298 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | PRINTS | E-class P450 group I signature | 433 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | PRINTS | E-class P450 group I signature | 301 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | SUPERFAMILY | Cytochrome P450 | 52 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | PRINTS | P450 superfamily signature | 292 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | PRINTS | P450 superfamily signature | 433 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | PANTHER | CYTOCHROME P450 | 32 | 467 | - | - | |
| Cre10g2027 | 490 | CDD | CYP86A | 65 | 468 | - | - | |
| Cre10g2027 | 490 | Gene3D | Cytochrome P450 | 46 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre10g2027 | 490 | Pfam | Cytochrome P450 | 75 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre01g1139 | Cre-Chr1:21893252 | Cre10g2027 | Cre-Chr10:34913861 | 3.10E-177 | dispersed | |
| Cre10g1763 | Cre-Chr10:32034241 | Cre10g2027 | Cre-Chr10:34913861 | 1.20E-102 | dispersed | |
| Cre10g1764 | Cre-Chr10:32039833 | Cre10g2027 | Cre-Chr10:34913861 | 1.70E-109 | dispersed | |
| Cre10g2027 | Cre-Chr10:34913861 | Cre11g1350 | Cre-Chr11:14678281 | 6.40E-74 | dispersed | |
| Cre10g2027 | Cre-Chr10:34913861 | Cre06g2639 | Cre-Chr6:33995642 | 1.60E-112 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre10g2027 | K20624 | - | csv:101207686 | 879.396 |